Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq10763 107 1e-18 >seq10763 Length=10051 Score = 107 bits (118), Expect = 1e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 |||||| | || | ||||| || ||| || | |||||||||||| | |||||||| Sbjct 4950 CCAATCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCTGGAATCCAGAGGGCATAAAA 4891 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | || | |||| | ||| || ||||| ||||||||| ||||| || || ||||| Sbjct 4890 GAGGTCGCGTGCTCGAACTTCCTCCTTTCCATGATTCTTTCGGAGATCCAAAAACTCAAA 4831 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 | ||| | ||||||||||| | ||||| || || ||| | || ||||| Sbjct 4830 GACATCCGCATGCCATGGTTCAAGGTAGATGGCGAATGCACCAGGGCGCTTGTTACCACC 4771 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 |||||| || ||||| || || | ||||||||| | ||| ||||| | || | || Sbjct 4770 TTGATCGACATATCTAGCGGTATTGTTGAAAACTCGAAGCATAGGAACGATACCGTTAGA 4711 Query 26146 AAATCCGTTTGTGC 26159 | ||| ||||||| Sbjct 4710 ATTTCCATTTGTGC 4697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253003680615275