Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq10763 107 1e-18
>seq10763
Length=10051
Score = 107 bits (118), Expect = 1e-18
Identities = 176/254 (69%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
|||||| | || | ||||| || ||| || | |||||||||||| | ||||||||
Sbjct 4950 CCAATCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCTGGAATCCAGAGGGCATAAAA 4891
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
| || | |||| | ||| || ||||| ||||||||| ||||| || || |||||
Sbjct 4890 GAGGTCGCGTGCTCGAACTTCCTCCTTTCCATGATTCTTTCGGAGATCCAAAAACTCAAA 4831
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
| ||| | ||||||||||| | ||||| || || ||| | || |||||
Sbjct 4830 GACATCCGCATGCCATGGTTCAAGGTAGATGGCGAATGCACCAGGGCGCTTGTTACCACC 4771
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145
|||||| || ||||| || || | ||||||||| | ||| ||||| | || | ||
Sbjct 4770 TTGATCGACATATCTAGCGGTATTGTTGAAAACTCGAAGCATAGGAACGATACCGTTAGA 4711
Query 26146 AAATCCGTTTGTGC 26159
| ||| |||||||
Sbjct 4710 ATTTCCATTTGTGC 4697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253003680615275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |