Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq10129 141 1e-28
>seq10129
Length=31709
Score = 141 bits (156), Expect = 1e-28
Identities = 207/293 (71%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 139248 GCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCG 139307
|| ||||| | ||||| | || |||||||| | ||||||||| || ||| || ||
Sbjct 8246 GCAATAGCCTTGAGTCCTTGTGGTCCATGATAAACAGCATAGAATGCACTCATGTTGGCT 8305
Query 139308 AGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCT 139367
|||| ||| || |||||||| | ||| || ||||| || ||||| | ||||| ||||||
Sbjct 8306 AGCAATGCCTGCGCTGTGCAAACGTTGCTAGTTGCCTTTTCTCTCCGGATATGTTGCTCT 8365
Query 139368 CTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACA 139427
|| ||||||| || ||||| ||| || ||| || ||| || ||| |
Sbjct 8366 CTTGTTTGTAAGGCCAATCTCATTGCCTTATCACCTAATCTATCCTTGGATACACCGATG 8425
Query 139428 ATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGA 139487
|| | || |||||||||| |||||||||||| | ||||||||||| ||||| |||
Sbjct 8426 ATACGTCCGGGTATCTTTCGCTTATACTTGTCACTAACCGCAAAGAATGCGGCATGGGGA 8485
Query 139488 CCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540
|| || ||||| | || | ||| || | ||| | | || | ||||||||
Sbjct 8486 CCACCATATCCAAATGGTACACCGAAACGTTGAGCATTTCCAAATGCAATATC 8538
Score = 125 bits (138), Expect = 8e-24
Identities = 177/246 (72%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||||| ||
Sbjct 7115 ACACCAATAGGACCGACGCCTGGTCCACCACCACCATGAGGAATACAGAAAGTCTTGTGA 7174
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || ||||| || ||||| || ||| |||| |||| ||||| | ||||||
Sbjct 7175 AGGTTAAGATGGCAGACATCAGCGCCAATCTCACCTGGTGAGCAAAGACCGATTTGTGCA 7234
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || |||||||| | ||||| ||||| |||| | |||||||| | || | |
Sbjct 7235 TTCATGTTGGCACCATCCATGTATACTTGACCGCCATGTTGGTGAACGATATCGCA-AGC 7293
Query 138363 TG-TCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421
| | |||| | | ||| ||||||||| || || ||||| ||||| ||| |
Sbjct 7294 GGCTTTGATTTCCGGTTCGAATACACCAAATGTGCTAGGGTATGTGATCATGATAGCTCC 7353
Query 138422 GAGTTC 138427
||||||
Sbjct 7354 GAGTTC 7359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578913164198040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |