Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq655 116 5e-21 >seq655 Length=7676 Score = 116 bits (128), Expect = 5e-21 Identities = 157/214 (73%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| |||| || ||||||||||| || ||||| || ||||| ||| || Sbjct 3470 AATGCAAATCTTTGTTAAGACTTTGACTGGAAAGACAATTACGTTGGAAGTGGAATCGTC 3411 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| ||||| || | || || ||||| || ||||| || || || || || Sbjct 3410 AGATACCATTGATAACGTAAAGACAAAGATCCAAGACAAGGAAGGTATTCCACCCGATCA 3351 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| | ||||| | |||||| ||||| | || || |||||| | || ||||||| Sbjct 3350 ACAACGTTTGATCTTTGCCGGAAAGCAATTGGAGGACGGTAGAACTCTTTCGGATTATA- 3292 Query 156002 TATATCCAAAGAGGCGA-CGCTT--CATTTAGTG 156032 | ||||||| ||| || | ||| ||||| ||| Sbjct 3291 -ACATCCAAA-AGGAGAGCACTTTACATTTGGTG 3260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731764259293200