Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq655 116 5e-21
>seq655
Length=7676
Score = 116 bits (128), Expect = 5e-21
Identities = 157/214 (73%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| |||| || ||||||||||| || ||||| || ||||| ||| ||
Sbjct 3470 AATGCAAATCTTTGTTAAGACTTTGACTGGAAAGACAATTACGTTGGAAGTGGAATCGTC 3411
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| ||| ||||| || | || || ||||| || ||||| || || || || ||
Sbjct 3410 AGATACCATTGATAACGTAAAGACAAAGATCCAAGACAAGGAAGGTATTCCACCCGATCA 3351
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||| | ||||| | |||||| ||||| | || || |||||| | || |||||||
Sbjct 3350 ACAACGTTTGATCTTTGCCGGAAAGCAATTGGAGGACGGTAGAACTCTTTCGGATTATA- 3292
Query 156002 TATATCCAAAGAGGCGA-CGCTT--CATTTAGTG 156032
| ||||||| ||| || | ||| ||||| |||
Sbjct 3291 -ACATCCAAA-AGGAGAGCACTTTACATTTGGTG 3260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731764259293200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |