Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq655 105 7e-18 >seq655 Length=7676 Score = 105 bits (116), Expect = 7e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 137261 ||| ||||| | || ||||| ||||| |||||||| ||| | ||||| ||||| Sbjct 3716 AACCAAATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGAAAGTGTGCGGCCATCTTC 3775 Query 137262 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 137321 ||||||||||||||| |||||| |||||||||||| ||||| || || || || || | Sbjct 3776 GAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGGGATACCCTCCTTATC-TT 3834 Query 137322 AATTTTTTGTTTTAGC-TGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCT 137380 | | || || ||| | | || | ||||| | | ||| || |||| ||| | |||| Sbjct 3835 GAATCTTAGTCTTAACGTTGTCGATAGTGTCCGAAGATTCAACCTCAAGAGTGATAGTCT 3894 Query 137381 TGCCGGTCAATGTTTTTACGAATAT 137405 | ||||| | || || |||| ||| Sbjct 3895 TTCCGGTAAGAGTCTTGACGACTAT 3919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488472080216400