Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq10763 84.2 2e-11
>seq10763
Length=10051
Score = 84.2 bits (92), Expect = 2e-11
Identities = 188/276 (68%), Gaps = 6/276 (2%)
Strand=Plus/Minus
Query 138126 AGCACGAATT-TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCAC 138184
|||||||||| || | | |||||| || || || || | | ||||| ||||||||||
Sbjct 4677 AGCACGAATTCTGTGG-ATGTTGAGACCAATACCTCCAGCATTCTTAGAAATCATGGCAC 4619
Query 138185 AATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAAC 138244
|| || | ||| ||| || || | || || || |||| |||| | || | |
Sbjct 4618 AAATCTTCAAAGTATCATAAATTCCATCAATACTATCCTCCTTCATGTCAATGAGGAAGC 4559
Query 138245 ACGACGACATTTGAGGCATTTTCATG--CCAGCCGAGAATAGAGTGGGACTAGCGTGGGT 138302
| || || | ||| ||| || | || || || ||||| || || ||| |||||| ||
Sbjct 4558 ATGAAGAAAGTTG-GGC-TTGTGGTGTACCCGCGGAGAAGAGTGTTGGAGAAGCGTGTGT 4501
Query 138303 AAACATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCATG 138362
||| ||| | ||| || | || | || || || ||||||||||||||||| ||
Sbjct 4500 AAAGTATTTGTTGGACATTAAGTTGTAGGTTTCAATGGCGCTCTCGATATCATCACCGTG 4441
Query 138363 AATCTGAAGAGCGACACGCATCAGCATGTGTTGAGG 138398
||| || || |||||||| | ||| ||||| ||
Sbjct 4440 AATACCAACGGCAACACGCATAATCATTTGTTGTGG 4405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445028876540640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |