Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq10763 84.2 2e-11 >seq10763 Length=10051 Score = 84.2 bits (92), Expect = 2e-11 Identities = 188/276 (68%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 138126 AGCACGAATT-TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCAC 138184 |||||||||| || | | |||||| || || || || | | ||||| |||||||||| Sbjct 4677 AGCACGAATTCTGTGG-ATGTTGAGACCAATACCTCCAGCATTCTTAGAAATCATGGCAC 4619 Query 138185 AATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAAC 138244 || || | ||| ||| || || | || || || |||| |||| | || | | Sbjct 4618 AAATCTTCAAAGTATCATAAATTCCATCAATACTATCCTCCTTCATGTCAATGAGGAAGC 4559 Query 138245 ACGACGACATTTGAGGCATTTTCATG--CCAGCCGAGAATAGAGTGGGACTAGCGTGGGT 138302 | || || | ||| ||| || | || || || ||||| || || ||| |||||| || Sbjct 4558 ATGAAGAAAGTTG-GGC-TTGTGGTGTACCCGCGGAGAAGAGTGTTGGAGAAGCGTGTGT 4501 Query 138303 AAACATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCATG 138362 ||| ||| | ||| || | || | || || || ||||||||||||||||| || Sbjct 4500 AAAGTATTTGTTGGACATTAAGTTGTAGGTTTCAATGGCGCTCTCGATATCATCACCGTG 4441 Query 138363 AATCTGAAGAGCGACACGCATCAGCATGTGTTGAGG 138398 ||| || || |||||||| | ||| ||||| || Sbjct 4440 AATACCAACGGCAACACGCATAATCATTTGTTGTGG 4405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445028876540640