Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq10338 89.7 2e-12 >seq10338 Length=29807 Score = 89.7 bits (98), Expect = 2e-12 Identities = 117/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || ||||| || |||| || ||||| | || || || || | || ||||| || Sbjct 12993 CGTCTCGTCGCATTCGCTGCTGTTGAAGGTATCTTCTTCAGTGGTT-CATTCGCCTCTAT 13051 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 ||||||| | || |||||||| | ||| |||||| || || ||||| || ||| Sbjct 13052 CTTCTGGCTCAAGAAGCGTGGTTTGATGGCCGGTCTTACTTTCTCCAACGAGCTCATCTC 13111 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || ||||||||| | ||| |||||||||||| ||||||| Sbjct 13112 CCGTGACGAGGGTCTTCATACCGACTTCGCCTGCCTTCTCT 13152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588096331513765