Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq10763 156 5e-33
>seq10763
Length=10051
Score = 156 bits (172), Expect = 5e-33
Identities = 491/758 (65%), Gaps = 16/758 (2%)
Strand=Plus/Plus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254
||||| || ||| | ||||| |||||||| || | | | | | ||| || ||| ||
Sbjct 4420 ATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAGAGCGCCATTGAAACCTACAAC 4479
Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314
|||||| | | || |||||||| ||||| | ||||| || ||| ||| |||||
Sbjct 4480 TTAATGTCCAACAAATACTTTACACACGCTTCTCCAACACTCTTCTCCGCGGGTACACCA 4539
Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374
|| | || | || |||||||| | | |||||||| || || || || ||
Sbjct 4540 CAAGCCCAACTTTCTTCATGCTTCCTCATTGACATGAAGGAGGATAGTATTGATGGAATT 4599
Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434
|| || || | ||| |||||| || || ||| | || ||||| ||| || ||
Sbjct 4600 TATGATACTTTGAAGATTTGTGCCATGATTTCTAAGAATGCTGGAGGTATTGGTCTCAAC 4659
Query 53435 -TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
| | | ||| | ||||| | || || || || || || || | | |
Sbjct 4660 ATCCACAGAA--TTCGTGCTACTGGTGCATACATTGCTGGCACAAATGGAAATTCTAACG 4717
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| ||||| |||||||| || || |||||||| || || | || ||| | || ||||||
Sbjct 4718 GTATCGTTCCTATGCTTCGAGTTTTCAACAATACCGCTAGATATGTCGATCAAGGTGGTA 4777
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
|||||| || | |||||||||||||| || || ||||| || || | | ||||
Sbjct 4778 ACAAGCGCCCTGGTGCATTCGCCATCTACCTTGAACCATGGCATGCGGATGTCTTTGAGT 4837
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672
|| | || || || |||||| || | || || | || || ||||| ||| |
Sbjct 4838 TTTTGGATCTCCGAAAGAATCATGGAAAGGAGGAAGTTCGAGCACGCGACCTCTTTTATG 4897
Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732
| || |||||||| || ||||||||| | || || ||| ||| || ||| || |
Sbjct 4898 CCCTCTGGATTCCAGATCTCTTCATGAAGCGTGTTGAAAAGAACGGAGATTGGACACTCA 4957
Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGT 53792
||||||| ||||| || || ||| | | |||||| ||||| |||||| | | | |
Sbjct 4958 TGTGCCCCAACGAATGTCCTGGCTTGGCTGATGTCTATGGTGATGAGTTTGAAGCTCTTT 5017
Query 53793 ATCGGACGTACG------CAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGG 53846
|| | |||| || | | ||||| |||| ||||||| | ||
Sbjct 5018 ATGAGGGTTACGAGAAACAAGGTAAAGGCCG------TAAGACTATCAAGGCTCAAAAGC 5071
Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906
| ||| || | |||||| || ||| ||||| |||| || | |||| ||||| |
Sbjct 5072 TTTGGTATTCTATCCTCGAGGCACAGACTGAGACAGGAAACCCTTTCATGCTTTACAAAG 5131
Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
|| | |||| | |||||||| || ||||| |||||
Sbjct 5132 ATGCTTGCAACAAAAAGAGCAATCAAAAGAATCTCGGC 5169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547135442964600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |