Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq655 98.7 9e-16 >seq655 Length=7676 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||||||||| |||||||| ||||| || |||||||| | ||| |||| |||| || Sbjct 3260 CACCAAATGTAAAGTGCTCTCCTTTTGGATGTTATAATCCGAAAGAGTTCTACCGTCCTC 3319 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 | || || || ||||| || | ||| || || |||| || | | || ||||| Sbjct 3320 CAATTGCTTTCCGGCAAAGATCAAACGTTGTTGATCGGGTGGAATACCTTCCTTGTCTTG 3379 Query 39195 GATTTTCTGT-TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || ||| || | | | | ||||| ||| ||||| |||| ||| || | | Sbjct 3380 GATCTT-TGTCTTTACGTTATCAATGGTATCTGACGATTCCACTTCCAACGTAATTGTCT 3438 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| |||| || ||||||||||||||||| Sbjct 3439 TTCCAGTCAAAGTCTTAACAAAGATTTGCAT 3469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429483946380401