Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq655 98.7 9e-16
>seq655
Length=7676
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||||||||| |||||||| ||||| || |||||||| | ||| |||| |||| ||
Sbjct 3260 CACCAAATGTAAAGTGCTCTCCTTTTGGATGTTATAATCCGAAAGAGTTCTACCGTCCTC 3319
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
| || || || ||||| || | ||| || || |||| || | | || |||||
Sbjct 3320 CAATTGCTTTCCGGCAAAGATCAAACGTTGTTGATCGGGTGGAATACCTTCCTTGTCTTG 3379
Query 39195 GATTTTCTGT-TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || ||| || | | | | ||||| ||| ||||| |||| ||| || | |
Sbjct 3380 GATCTT-TGTCTTTACGTTATCAATGGTATCTGACGATTCCACTTCCAACGTAATTGTCT 3438
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||| |||| || |||||||||||||||||
Sbjct 3439 TTCCAGTCAAAGTCTTAACAAAGATTTGCAT 3469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429483946380401
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |