Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq655 93.3 3e-14
>seq655
Length=7676
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || ||||| || ||||| | || || || || |
Sbjct 3697 ATGCAGATCTTCGTCAAGACCCTTACTGGAAAGACAATCACATTAGAGGTCGAGTCGTCT 3638
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | || || || | || || || || || | || || |||||
Sbjct 3637 GATACCATCGATAATGTGAAGACTAAGA-TTCAAGATAAGGAGGGCATCCCACCTGATCA 3579
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| ||| | || || || || || || |||| || | ||||| ||| |||||||||
Sbjct 3578 GCAACGTCTCATTTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACCTTATCCGATTACAA 3519
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| ||||| || || || |||||||| ||
Sbjct 3518 CATCCAAAAGGAATCGACTTTACATTTGGT 3489
Score = 82.4 bits (90), Expect = 5e-11
Identities = 124/174 (71%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACA 23693
|| || || || ||||| || || ||||| || | |||||| | || ||| | || ||
Sbjct 4186 ACCGGCAAGACCATCACCCTTGAGGTTGAATCTTCCGACACTATCGACAATGTCAAGACC 4127
Query 23694 AAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAA 23753
|| | || || || || ||| | || || || ||||||||||| || ||||| |||||
Sbjct 4126 AAGA-TTCAGGATAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTTGCTGGCAA 4068
Query 23754 ACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807
||||| || || | ||||| | ||| |||||||| || || ||||| ||
Sbjct 4067 GCAACTTGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCTAC 4014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337961084742716
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |