Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq10763 455 5e-123
seq10338 141 1e-28
>seq10763
Length=10051
Score = 455 bits (504), Expect = 5e-123
Identities = 1346/2060 (65%), Gaps = 39/2060 (2%)
Strand=Plus/Minus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
||||| ||||| || | || || | | ||||| ||||||||||| ||||| || |||
Sbjct 6161 GTGAATTGAATTGGTGCCGAAGCAGCCATAGTACGGAGATAGTACATTCCAGTCTTGAGA 6102
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
|||| ||||||| |||||||||| || | ||| | || || ||
Sbjct 6101 CCCAATTTCCATCCAGCGAAATGCATGGAAGTGATCTTGCCCATTGTAGGGTCCTTCATG 6042
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
||||| |||||||| ||| |||||| |||||||| || | || || ||||||| | |
Sbjct 6041 TGAATGTTCATCGATTGAGATTGATCAATGAAAGCACCACGGTCTGCGGCCATTTGAACA 5982
Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616
||| | ||||| |||||||||| || ||| | | ||| || || ||||||
Sbjct 5981 ATGTTTCGTTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCTTTAATCTCGGCTGGAATG 5922
Query 75617 TTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673
|| | ||||||||||||| || ||||||| || || |||||| || | |||| |
Sbjct 5921 TTGGGAATATTTTGAATGGAACCACCATCAGCGATGATACGATTCTTCATGTTATCAGAC 5862
Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733
|| | | | ||| ||| | |||| || || ||||| | ||| || || ||
Sbjct 5861 CAAAGTCCCATGTCGACCAAATCCTTAAGAAGCCATGGGTTAACGACTTGGAACTCACCG 5802
Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793
| ||| || | || | |||||| || || ||||| || | | |||||||| ||
Sbjct 5801 GCCAACACACGGCGTGAGTAAATGTTGGAAGTGTATGGCTCGAAACATTCATTGAAACCG 5742
Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853
| |||||||| || ||||| |||||||| || || | |||||||| | || ||||
Sbjct 5741 AGAATTTGAGATGTGCTGGCAGTTGGCATAGGAGCAACAAGCAAACTATTCCGGATACCA 5682
Query 75854 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCC 75913
||| |||| | || ||| | | ||||||||||||||| | || |||| ||
Sbjct 5681 TGTTGCTTGATAGATTGCTTGAGAGAATCCCAATCCCAAAGATCCGTAGGAGTAACACCC 5622
Query 75914 CAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTC 75973
|| | ||| ||||| || || ||| | ||||| | ||||| ||||| |
Sbjct 5621 CACATATCATATTGAAGCTCACCCTTGGAGACTGGAGATCCTTCATATGACTCGTATGGG 5562
Query 75974 CCG---TCCTTTTCAGCTAGTTCGCAAC---TCGCCTCTAACGCACCGTAATAAATTGTT 76027
|| ||||| |||| || ||| | || || ||||||| || || ||
Sbjct 5561 CCTAATTCCTTG---GCTA--TCTGAACAGATGAAGTCAAA-GCACCGTGGTAGATGGTC 5508
Query 76028 TCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGA 76087
|| || || | | || |||| | |||||| | ||| || || || | | |
Sbjct 5507 TCAAAGATTTGGATGTTGAGATGCTTCGCTTCGGGTGAATCGAATGGTAAACGGAGAGCC 5448
Query 76088 ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 76147
| || ||||| || || || ||||| |||| | ||||||||| ||| | ||||
Sbjct 5447 AAGAAGGCATCAGCAAGACCTTGAACACCAACAGCAATAGGTCGATGACGGAAATTGCTT 5388
Query 76148 ATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 76207
|| |||||| | || || ||||| ||||| ||||| || || | |||||||||
Sbjct 5387 CTTCTGGCTTCTTCGACGGGATAGTAATTGATATCGATAATCTTGTTCAAGTTTCTGACA 5328
Query 76208 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCA------CA 76261
|| |||| ||| || || | || || | |||||| | |||| || || ||
Sbjct 5327 ACAACTTGAACGACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCGGCCATGTTGACA 5268
Query 76262 AACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATAT 76321
|| | ||||| ||||| || | |||||| || ||||||| || | |||
Sbjct 5267 AAGGTTGGGAGAGCAATAGAAGCCAAATTACAGCAAGCAACCTCATCAGGTGCAGAGTAT 5208
Query 76322 TGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTC 76381
| | || |||||||| | || | ||| || || ||||| | ||| ||||||
Sbjct 5207 TCGACGATTTCCGTGCACAAGTTGGAGCTGCGGATTGTGCCGAGATTCTTTTGATTGCTC 5148
Query 76382 TTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCG 76441
|||||||| || | || || ||||| | || || |||| || ||| |||||| |||
Sbjct 5147 TTTTTGTTGCAAGCATCTTTGTAAAGCATGAAAGGGTTTCCTGTCTCAGTCTGTGCCTCG 5088
Query 76442 ATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCA 76501
| ||||| | ||| | | ||| || || | | || || | | |||
Sbjct 5087 AGGATAGAATACCAAAGCTTTTGAGCCTTGAT-----AGTCTTACGGCCTTTACCTTGTT 5033
Query 76502 TATTGTGT-----ATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556
| | || ||| | |||||| ||||| || | |||||| |||| |||||||
Sbjct 5032 TCTCGTAACCCTCATAAAGAGCTTCAAACTCATCACCATAGACATCAGCCAAGCCAGGAC 4973
Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616
|||| || || ||||| | || ||| || || | | | ||| || ||||| |||||||
Sbjct 4972 ATTCGTTGGGGCACATGAGTGTCCAATCTCCGTTCTTTTCAACACGCTTCATGAAGAGAT 4913
Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676
| || ||||| || ||| ||| || || || | || | ||| || ||||| |||||
Sbjct 4912 CTGGAATCCAGAGGGCATAAAAGAGGTCGCGTGCTCGAACTTCCTCCTTTCCATGATTCT 4853
Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736
|| ||||| | ||||| | | ||| | |||||||||||| || || || || |
Sbjct 4852 TTCGGAGATCCAAAAACTCAAAGACATCCGCATGCCATGGTTCAAGGTAGATGGCGAATG 4793
Query 76737 CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCA 76796
|||| || || || ||||| || ||||| | |||||| || || || || |||||| |
Sbjct 4792 CACCAGGGCGCTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTGAAAACTCGAA 4733
Query 76797 ACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC 76856
||| |||| || |||||||| | |||||||| |||| ||| || ||| ||||
Sbjct 4732 GCATAGGAACGATACCGTTAGAATTTCCATTTGTGCCAGCAATGTATGCACCAGTAGCAC 4673
Query 76857 GAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTT 76916
|||| | || || || || ||||| || | ||||| || | ||||| |
Sbjct 4672 GAATTCTGTGGATGTTGAGACCAATACCTCCAGCATTCTTAGAAATCATGGCACAAATCT 4613
Query 76917 TCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAG 76976
|||| || ||||| || || || |||||||| ||| |||||| || || || || ||
Sbjct 4612 TCAAAGTATCATAAATTCCATCAATACTATCCTCCTTCATGTCAATGAGGAAGCATGAAG 4553
Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036
| | ||| || || || || || | ||| ||||| || || || || |||
Sbjct 4552 AAAGTTGGGCTTGTGGTGTACCCGCGGAGAAGAGTGTTGGAGAAGCGTGTGTAAAGTATT 4493
Query 77037 TTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT-TCTATATC-CCATTGATGAATTCC 77094
| | || | || ||||| |||||||| | ||| || ||||| || | ||||| ||
Sbjct 4492 TGTTGGACATTAAGTTGTAGGTTTCAATGGC-GCTCTCGATATCATCACCG-TGAATACC 4435
Query 77095 TACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAA 77154
|| || |||||||| | ||| || || || ||||| || || || | |
Sbjct 4434 AACGGCAACACGCATAATCATTTGTTGTGGACGTTCAGCAACTTTTCCATCGAGGCGGAG 4375
Query 77155 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 77214
| ||||||| | || | ||| || || || || || | ||| ||||||| |||||
Sbjct 4374 GAGGTATGATCTCTCAAGAGTCTTGAATCCGAAGTATTGGTAGTTGAAGTCTCGATCGTA 4315
Query 77215 AATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGTAG- 77273
|| ||| | || || |||| ||| || | | |||| | || ||| | | |
Sbjct 4314 AACGATAGCAGAGTTAAGTTCTGCCTCATGTCTCATAAC-ACATTCATATGTTTCCTTGC 4256
Query 77274 AAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTA 77333
||| || |||||| | | |||||||| | || |||| ||| ||| || |
Sbjct 4255 TAATCATGGGAGATTTTGTACCATTTTTGGTGTTCGTGTAGTGGTATAGGTCACTGATGA 4196
Query 77334 CGTCGCTA-AATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCT 77392
| | || | ||| |||| || |||| |||||| ||||| || || || || | |||||||
Sbjct 4195 CAT-GCGAGAATTGTTTCTTGGTTTGCTTGTGGAGATTGGAAACTGCAATACGAGCAGCT 4137
Query 77393 AGAATTGCATAGTCAGGATG 77412
| || ||||| || |||||
Sbjct 4136 AAGATGGCATAATCGGGATG 4117
>seq10338
Length=29807
Score = 141 bits (156), Expect = 1e-28
Identities = 579/919 (63%), Gaps = 64/919 (7%)
Strand=Plus/Minus
Query 46323 TGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCC 46382
|| |||||| || || ||||| ||| | ||||| |||||||| || || || |||||
Sbjct 13451 TGCCATAACACCAGCCTTCTGGTAATCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCC 13392
Query 46383 TTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAA 46442
| | || || |||||||| || || || || || || | |||| |||| |
Sbjct 13391 AGCGAGAGAAATGTTTTCCATGAAGTCGAATGGGTTGGTGGAACGGTAAACCTTTTCATT 13332
Query 46443 TCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACA 46502
|| | | || || | ||||| ||||| || || || |||||||| || |
Sbjct 13331 ACCAAGGGCAAGAAGAAGACGGTCTGCGACGAACTCAATGTATTGTTTCATCAGATCCGA 13272
Query 46503 ATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGAC 46562
||||| || | ||| || ||||| || || | || || || ||||| || ||
Sbjct 13271 GTTCATGCCAAGGAGAGCACATGGAAGAGCTTCGGTCAAGAATTCCTGCTCAATTGTAAC 13212
Query 46563 AGCATCCGATATTATCGATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTA 46620
||| || | || | || | || | || | |||||| ||||| |||| ||
Sbjct 13211 AGCCTCTGTGATGAC--ATCCTGAACGGCTTGTTTACTTGGGCGATGCTTCAAGTGCGAG 13154
Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680
|| | | || || || || |||||| || || || | || | ||||| ||
Sbjct 13153 AAGAGAAGGCAGGCGAAGTCGGTATGAAGACCCTCGTCACGGGAGATGAGCTCGTTGGAG 13094
Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740
|| || || || | ||| | |||||||| |||||||| || |||| ||||| || |||
Sbjct 13093 AAAGTAAGACCGGCCATCAAACCACGCTTCTTGAGCCAGAAGATAGAGGCGAATGAACCA 13034
Query 46741 GAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA 46800
||||| || ||||| ||||| ||||||||||| || | | | | | | ||
Sbjct 13033 CTGAAGAAGATACCTTCAACAGCAGCGAATGCGACGAGACGTTGAGCAAATGTAGATTCT 12974
Query 46801 TT---ATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTT--TAC-------------- 46841
|| || ||||| || ||||||||| ||||| ||||| |||
Sbjct 12973 TTGTCTTGGATCCATCTAACAGCCCAATCGGCCTTCTTCTTAATACAAGGGACTGTGTAA 12914
Query 46842 -----ACAAGGCATT-------------------------------GTTTCTATAGCATT 46865
| |||||||| ||||| ||||||||
Sbjct 12913 TGATTAGAAGGCATTCATACTTGTGATAAATGCATATAACTCACTGGTTTCAATAGCATT 12854
Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925
|||||| | || | | | || || | |||||||| || | |||| || |
Sbjct 12853 GAAGAGATATGTTCGCTGAGCTTGTTCCTTGATGTATGTATCGATGAGAAGAGAGTATGT 12794
Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985
||| || |||||||| || || ||||| || ||||| || |||| |||||||| ||
Sbjct 12793 TTCCGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGTGCTTCAGGGAT 12734
Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAG 47044
||| ||||| || || ||||| ||||| |||||||| || ||||||||| || |
Sbjct 12733 CTGGACCTCACCACTGAAACGTTC-GACAAGGTTCTCATTGACAATTCCATCAGATGCGG 12675
Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCC 47101
| || ||||| | || || | || || |||||| | | ||| || ||||
Sbjct 12674 CGAAGAATGCGAGGACGTGAGAGACGAAGTAACGCTCATCGTCATTGAGTCTGTTGTTCC 12615
Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161
|||| | | ||| ||||| | || | ||||| || |||||||| || ||||| || |
Sbjct 12614 AGTCGTGAAGATCCTTTGACAAGTCGATCTCTTCTGCGGTCCAGAAAGATGCCTCAGCCT 12555
Query 47162 TTTTATACATATTCCATAT 47180
| || ||||| | ||| ||
Sbjct 12554 TCTTGTACATCTGCCAAAT 12536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712829447144640
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