Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5020 154 3e-32 >seq5020 Length=23815 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 230408 ACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAAC 230467 |||||||||||||| | ||||||| |||| ||| ||| | ||||||||||| | Sbjct 18749 ACGAAAAGGAGTTCCTCACTGACGCTCTTCCCTGTGCCCTCCTCGGCATGAACGCCACCC 18808 Query 230468 TTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| |||||||| || ||||| || |||||| | | || || ||||| |||||| Sbjct 18809 TCATGCAGCAGTACATTGAGTTCGTCGCTGACCGCCTCCTCGTCGCTCTTGGCAACGAGA 18868 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | ||||||||||| | ||||| || | || |||||| ||| || || || |||| Sbjct 18869 AGGTGTACAACTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGA 18928 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 | ||||||||||| ||||||||| ||||| |||| | ||||||| ||| Sbjct 18929 CTAACTTCTTCGAGAAGCGTGTCGCCGACTACCAGAAGGCTGGTGTCATG 18978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057744631465280