Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1916 93.3 5e-14 >seq1916 Length=63381 Score = 93.3 bits (102), Expect = 5e-14 Identities = 203/300 (68%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 |||||||| || ||| | | ||| || |||||||| ||||| ||| || ||| Sbjct 55580 ACGTAGAATTGAGCAAAC-ATGTGACAAGGCGGCAGAGCCATTTTCTTCAGATCTCTCGG 55638 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTAT 145985 ||||||||||| |||| | |||| | ||| |||||| |||| | || || Sbjct 55639 GTTCCAGGCGGAAAGGATCATTCTCCGG---TCGAATGGGTTCGTCTTCAACTGGTGGAT 55695 Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045 |||| | || || || ||||| |||||| ||| || || |||| || || || | Sbjct 55696 CAGGCCAGCTAGTTGATCAACGCCTTGCCCCGTGTAGTCGGTTTTGGCATCAACATATTC 55755 Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105 ||| || || |||||||| || || || || || || || ||||| || ||| | || Sbjct 55756 GGCGCCAAAATGCCTCCATTGAAAACCATATACAGGGCCAAGGTCACCAACCTCGCGATG 55815 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 || ||| | | | ||||||| | || || || || | ||||||||||||| ||| Sbjct 55816 GGAGAGGCCGACGCTGTCGAGGAACGCTCGTGAACCATTACCATCCCAGATCTTGAAGCC 55875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590033606378240