Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3618 334 7e-87 seq629 91.5 1e-13 seq3611 89.7 5e-13 >seq3618 Length=19201 Score = 334 bits (370), Expect = 7e-87 Identities = 647/951 (68%), Gaps = 8/951 (1%) Strand=Plus/Plus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || ||||| ||||| || || |||||||| | | ||||| | || || || || Sbjct 1640 GAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAA 1699 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 || ||| | || || || | || |||||||||| || || ||||| | ||| Sbjct 1700 AGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCC 1759 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||| | ||||| ||| | Sbjct 1760 TTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGC 1819 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCG 23266 | ||||| | | ||| | | |||| || ||||||||| | |||||| || Sbjct 1820 TTTTGAGCCTTGATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCC 1879 Query 23267 TCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTC 23326 |||||||| |||| || |||||||| ||||| || | | | ||||||||||| || Sbjct 1880 TCAAATTCCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTC 1939 Query 23327 CACATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAG 23383 ||| | ||||| || || || |||| || |||||||| ||||| |||||| | Sbjct 1940 CAC---TCGCCATTTTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGG 1996 Query 23384 AACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCC 23443 || || || ||||| || |||||||||||||| |||||| | ||| | || || Sbjct 1997 AAAAGATCACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCA 2056 Query 23444 AACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCG 23503 || ||||| | ||||| || || ||||||| ||| || || || || | ||||||||| Sbjct 2057 AAGACGTCTGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTGCCA 2116 Query 23504 CCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTG 23563 || || || ||||| ||||| ||||||||| | || | ||||| ||||| || || ||| Sbjct 2117 CCTTGGTCAACGTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTG 2176 Query 23564 GACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAA 23623 || | |||| ||| || | || || | || |||| |||||| | || Sbjct 2177 GAGGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTGAGG 2236 Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683 || ||||| || || ||| || ||||| ||||| || || ||||| |||||||| Sbjct 2237 CCAATGCCACCAGCCATTTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCA 2296 Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAA-CACGAAGACATTTGCGCTTTGGGCGT 23742 || |||||||| ||||| | ||| ||||||| || || || | || |||| || || Sbjct 2297 TCAATGCTGTCATCTTTCATGTCGA-CAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGT 2355 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802 | | || ||| || || || |||||| || || | ||||||| || ||||| Sbjct 2356 ACCAGCATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTA 2415 Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862 || || || || ||||| | || || || |||| ||||||||||| ||||| Sbjct 2416 GGTCTCAATAACGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCAT 2475 Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922 || || || | ||| || | |||||| | |||| ||| ||||| || | || || Sbjct 2476 GTGCTGTGGACGCTCAACAATCTTGCCGTTGAGCTTGAGCAGGTATGATCGCTCCAGGGT 2535 Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 || || ||||| || | ||||| || ||||| |||| ||| || || || Sbjct 2536 CTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTACACGATCGCGGA 2586 Score = 109 bits (120), Expect = 5e-19 Identities = 355/540 (66%), Gaps = 25/540 (5%) Strand=Plus/Plus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 ||||| || || |||||||| ||||| || || | |||||| | ||||| || Sbjct 758 GTGCGCAGGTAGTACATGCCAGTCTTGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTG 817 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATA 22264 || | || || || || | ||||| | |||| ||||||| ||| ||||| Sbjct 818 GTGATCTTGCCCATGCTGGGGTCCTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATG 877 Query 22265 AACGCTCCTCGATCGGCGGCCATATTTATCAATGTA-CGCATCGACATTTCCCATACGGT 22323 || || || || || || ||||| | | |||| | ||| || || ||||| || || Sbjct 878 AAAGCACCACGGTCTGCCGCCATCTGCA-CAATTTGGCGCTGAGAGATCTCCCAAACAGT 936 Query 22324 CTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATT 22383 ||||||||| | ||| || || || ||| |||||| ||| ||||| | Sbjct 937 CTTGTACAGGGCCTTGACATCGTCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTC 996 Query 22384 GTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAA----ATCTT 22439 | ||||| ||||| || | ||| ||| | ||| | | |||| ||| | Sbjct 997 GGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGACCAA----GTTCAACAAGATCCT 1052 Query 22440 TGACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAA 22496 | | ||| ||| |||| || || || |||||||| | |||| || ||||| ||||| | Sbjct 1053 TCAGCAGCCATG--GGTTGACAACCTGGAACTCGCCAG-CAAGCACACGGCGCTGGTAGA 1109 Query 22497 TGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGG 22556 |||| || || | || || || | || ||||| || || ||||| | || || | Sbjct 1110 TGTTCGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAG 1169 Query 22557 TCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-T 22613 | ||||| || || | ||| || ||| | | ||| |||| |||| ||| ||| | Sbjct 1170 TGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGA---TTTGCTCCT 1226 Query 22614 TGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA 22673 |||| | |||||||||||| ||| ||| | || || ||||||||||||||||| Sbjct 1227 TGAGGCTGTCCCAGTCCCACAGGTCGCTGGGCTTGAC---GTTCCACATATCGTATTGCA 1283 >seq629 Length=20836 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| || || || || || |||||| | || || || | Sbjct 19246 AAGATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 19305 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || || ||| Sbjct 19306 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 19365 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || ||||| || || ||||||||||| ||| | || || || ||||||| || Sbjct 19366 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTAC 19425 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || || || || Sbjct 19426 AACATCCAGAAGGAGTCTACCCTCCACCTCGTCCT 19460 >seq3611 Length=65567 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||||||||| ||||| |||||||| |||| ||||| | || Sbjct 3509 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTCGAGGTTGAGTCATCT 3450 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||| ||||| || | || || || || Sbjct 3449 GACACCATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCGGATCAA 3390 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || |||||||| || ||| | || || ||| ||||||| || ||| Sbjct 3389 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTACAAC 3330 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || |||| || Sbjct 3329 ATCCAGAAGGAGAGTACTCTCCACTTGGTGCT 3298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445733769899520