Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3618 223 5e-53 seq5020 93.3 6e-14 >seq3618 Length=19201 Score = 223 bits (246), Expect = 5e-53 Identities = 803/1235 (65%), Gaps = 46/1235 (4%) Strand=Plus/Plus Query 65468 TAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCT 65527 ||| ||| ||| ||||| || || ||||||| ||| || || || | || || |||| Sbjct 1360 TAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTC-AGGCG 1418 Query 65528 A-TCAAATGGATAATTTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCAATACCG 65585 | || || || ||| |||| || || ||||| || | ||||||||||| | |||| Sbjct 1419 ACTCGAAAGGC-AATCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCG 1477 Query 65586 ATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCT 65645 || || | || | | | || | | || || || | |||||| | || | ||| Sbjct 1478 ATGGGCCGGTGACGCATGTTGCTGTTACGTGCCTCAGGGACAGGATAGTGGTTTACATCG 1537 Query 65646 ATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA 65705 ||||| || |||||||| | || | |||| | || || | ||| || || || Sbjct 1538 ATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAGTCG 1597 Query 65706 AATC--GC-TCATC-TATTACAAACATGTT--CAATGCAACAGATGCCAGATTACAAACG 65759 || | || ||||| || | | | | | || || | ||| || || || ||||| Sbjct 1598 AAGCATGCATCATCGTAGTTGATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTGCAAACA 1657 Query 65760 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATG 65819 || ||||| | || | | | ||| | || |||||||||||||| || | ||| Sbjct 1658 GCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGGATT 1717 Query 65820 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGA 65879 || || | || | || || ||||| ||| || || ||||| || || ||||||||| Sbjct 1718 GTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAATGGA 1777 Query 65880 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA 65939 ||||||| ||| |||| | || | |||| | ||| | | ||||||| || | Sbjct 1778 TTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTTTGAGCCTTGATGGTG 1837 Query 65940 GATTTGTATCTCTTT---TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 65996 ||| | ||| || || ||||| |||||| || || || ||| | Sbjct 1838 CGCTTG---CCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTC--CTCAC 1892 Query 65997 CAAA-CATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 66054 || | || | ||| ||||| || |||| |||||||| | | |||||| || | | Sbjct 1893 CATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATTTT 1952 Query 66055 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTC 66114 || || || ||||| |||||||| |||||||||||||| | || | ||| | || | Sbjct 1953 TCTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACGGGCAC 2012 Query 66115 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCC 66174 | ||||| || || ||||| |||||||||||| | | | || | |||| Sbjct 2013 GAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGAGTGCC 2072 Query 66175 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 66234 | ||||| | ||| ||||| | | ||||| || || || || || || || | ||| | Sbjct 2073 AGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTGCCACCTTGGTCAACGTAGC 2132 Query 66235 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCC 66294 || ||||| || | || | | ||| || | || |||||||| || || ||||| | Sbjct 2133 GGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTGC 2192 Query 66295 CGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGC 66352 ||| || || ||| | || ||||| | |||| || || || || || || Sbjct 2193 CGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTG--AGGCCAATGCCACCAGC 2250 Query 66353 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 66412 |||||| ||||| | ||||| || | ||| ||||||||||| || || || ||||| Sbjct 2251 CATTTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAATGCTGTCATC 2310 Query 66413 CATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA---CGACTAGTTCCCGCATTAAA 66469 |||||| | |||| ||| |||| | | ||| || || || ||||| || Sbjct 2311 TTTCATGTCGACAAGAA---AGCAAGACGATAGCTGAGCTTGAGGGGTACCAGCATTGAA 2367 Query 66470 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 66529 | || || || ||||| || || | || || | || ||||| ||||||||| | Sbjct 2368 GAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTCAATAAC 2427 Query 66530 TGAGTCTATAT------CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 66583 || |||| |||| |||| || || ||||| ||||| | ||||||||| Sbjct 2428 GCGCTCAATATTGTCACCCCA--GATG----CCGACAGCGACGCGCATAATCATGTGCTG 2481 Query 66584 AGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 66643 || | ||||| |||||| ||| | || | || ||| ||| |||| || || || Sbjct 2482 TGGACGCTCAACAATCTTGCCGTTGAGCTTGAGCAGGTATGATCGCTCCAGGGTCTTGAA 2541 Query 66644 ACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 66676 ||||| || | ||| ||||| || || ||||| Sbjct 2542 GCCAAAGTATTGGTAGTTGAAA--TCACGGTCGTA 2574 >seq5020 Length=23815 Score = 93.3 bits (102), Expect = 6e-14 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231 ||| |||||||| || | | || | |||||||| || ||||| || ||||| ||||| Sbjct 18660 GTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTGAGACCAGGCATGAGGCC 18601 Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291 |||||| || ||||| || ||||| || || | || |||||||| || || || || Sbjct 18600 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAAATACCCTCAACAGC 18541 Query 36292 CGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCAC-TGTCATGTATCCACTTTTGAGC 36348 || ||||||| || | || || | | | | ||||| |||||||| |||| Sbjct 18540 AGCGAAGGCAACGAGGCGCTGACCGAAGGATGAGTTCTTGTCAGCAATCCACTTGAGAGC 18481 Query 36349 CCAATCGGCCTTCTT 36363 ||| ||||||||||| Sbjct 18480 CCAGTCGGCCTTCTT 18466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658124621751040