Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq3110 132 2e-26 >seq3110 Length=303 Score = 132 bits (146), Expect = 2e-26 Identities = 194/274 (71%), Gaps = 3/274 (1%) Strand=Plus/Plus Query 67032 TCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCA 67091 ||||||| || ||||| | || ||||| | ||| || |||||||| ||||| |||||| Sbjct 31 TCGAAGGTGAAATCGGCGTCATGCACGTGGTCCTCCAGGCGCGCCTGATGTCCCAGGCCC 90 Query 67092 TGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGT 67151 |||||||| |||| || | ||| | | ||||| ||| | ||| |||||||| Sbjct 91 TGCGCAAGATCACCGGTAACATTAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGA 150 Query 67152 TGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGG 67211 | || |||||||||| || | | ||||| | |||||||| || || || | Sbjct 151 TCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGTAA---ACCACCACCGGTGGTAACG 207 Query 67212 CTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAG 67271 | ||| |||||||||||| || ||| |||| |||| || | || | | |||||||| Sbjct 208 CGCTGAAGTTCTACGCCTCGGTTCGCCTGGACATCCGCCGTACCGGTGCGGGGAAGGAAG 267 Query 67272 GCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 67305 ||||||| | ||||||| | ||||| || || Sbjct 268 GCGATGAAGTGGTCGGCAGCGAAACCCGCGTCAA 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242837067481472