Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq5607 105 6e-18 >seq5607 Length=30030 Score = 105 bits (116), Expect = 6e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 |||||| ||||||||| || || ||||||||| ||| | |||||| ||| | | | | Sbjct 20736 GCGCTCAATGATCAGCTGAGCAATGCGGTCGCCCTCCTTGATCTCGAAGTCGGTCTCGGC 20677 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| || | || || | ||| |||||||| ||||| || ||||| || || Sbjct 20676 GTGGTTGAAGAGAAGAACCTTGACCTGGCCACGGTAGTCAGCGTCGATGACGCCGGCACC 20617 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||||||||||| |||| |||||||| ||||| || || | |||||| Sbjct 20616 GGTGTCGATGAAGTTCTTGGAAGCCAGGCCCGAGCGAGGGGCAATGCGGCC 20566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430023707017472