Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq913 156 7e-34 >seq913 Length=33015 Score = 156 bits (172), Expect = 7e-34 Identities = 197/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| ||||||||| |||||||| || || |||||||| ||||| Sbjct 14079 GCCAAGCGCCACCGTAAGAT-TCTTCGAGACAACATCCAGGGCATTACCAAGCCTGCTAT 14021 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| || |||||||| || || |||||| |||||| || |||| || || | Sbjct 14020 TCGCCGTCTCGCACGTCGTGGCGGTGTAAAGCGTATCTCTGCCATGATCTACGAGGAAAC 13961 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | |||| ||||||| || || |||| || || || ||||| || Sbjct 13960 ACGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGCGACGCCGTCACATATACTGA 13901 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| ||| | || | |||||||| | || | || || Sbjct 13900 GCACGCCAAGCGCAAGACTGTCACTTCCCTTGACGTTGTCTATGCCCTCAAGAGGCAGGG 13841 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| || ||||| Sbjct 13840 CCGCACCCTCTACGGTTTCGGTGGTTAA 13813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79069845818208