Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_007145.2 Length=37639 Score E Sequences producing significant alignments: (Bits) Value seq5617 100 7e-17 >seq5617 Length=361 Score = 100 bits (110), Expect = 7e-17 Identities = 179/257 (70%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 35238 TACGCGCGGTCGAGCTTCACGTCATACAGGTTGATCGC--GAATTCCGGGCCGTTGTAGC 35295 || ||||| | |||||| | ||| || ||||| |||| | | ||||||||||||||| Sbjct 29 TAGGCGCGCTGGAGCTTGATGTCGTATAGGTT--TCGCTGGTAGTCCGGGCCGTTGTAGA 86 Query 35296 CTTCCGCGAACGCTGCCCACTTCCGGGCACGAAGCGCCGCTAGCAGCTTCTTGTCGGCCG 35355 |||||| | | ||| || ||||| | |||| |||| | ||||| | Sbjct 87 GCGTCGCGAATTCGGACCATTTGCGGGCCTTCAACGCCTTATGCAGAACCGGGTCGGTCT 146 Query 35356 CGACGTACCGCACGAACGCGTCGAGGTGCTCGGCTTCGCCCAGCTC-CATACGGGACACG 35414 || | | |||||||||||| ||| |||| | ||||| ||| | ||| ||| Sbjct 147 GGATGAAACGCACGAACGCGGCGAACTGCTGAGACTCGCC-AGCGCTCATGTCCTCGACG 205 Query 35415 AATTCGTCGACGCTCGCGTAACCCAGGCGTTTCCAGTGATACGCCATGATCTGGAACGCG 35474 ||| | ||||| || || |||||||| | ||||||| || ||||||||||||| || Sbjct 206 AATGTCTGCACGCTGGCATAGCCCAGGCGCTGCCAGTGAAACCCCATGATCTGGAATGCA 265 Query 35475 CCCCAGCTCGCGGACTC 35491 |||||| |||||||| Sbjct 266 CCCCAGGAGGCGGACTC 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120314832724672