Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3611 87.8 2e-12 >seq3611 Length=65567 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| || | ||||| | || | ||||| |||||||||||| | ||||| | Sbjct 3941 ACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCCGACACCATCGACAACGTCAAGTCA 3882 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| ||||| || || || || || |||||||| | || || | || ||||| Sbjct 3881 AAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAACAGCGCCTGATCTTCGCTGGCAAG 3822 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 || || || |||| | | | | | |||||| ||||| || || |||||||| |||| Sbjct 3821 CAGCTTGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAATCTACCCTCCAC 3762 Query 26973 CTGGTCCT 26980 ||||| || Sbjct 3761 CTGGTTCT 3754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478627361912320