Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3618 351 3e-91 >seq3618 Length=19201 Score = 351 bits (388), Expect = 3e-91 Identities = 1167/1786 (65%), Gaps = 52/1786 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| |||| || | |||||||| || || || Sbjct 2538 AAGACCCTGGAGCGATCATACCTG-CTCAAGCTCAACGGCAAGATTGTTGAGCGTCCACA 2480 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGA 363518 ||| ||| | ||||| || ||| | || ||| | || |||| || ||||| Sbjct 2479 GCACATGATTATGCGCGTCGCTGTCGGCATCTGGGGTGACAATATTGAGCGCGTTATTGA 2420 Query 363519 AACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATG 363577 || || || || | | || || | ||||| |||||| | || || | | ||||| Sbjct 2419 GACCTACAACCTCATGTCGAGCAAGTTT-TTCACTCACGCCTCACCCACGCTCTTCAATG 2361 Query 363578 CTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCA 363637 |||| || | | | | ||| | || |||||||||||| | | ||||| || || || Sbjct 2360 CTGGTACCCCTCAAGCTCAGCTATCGTCTTGCTTTCTTGTCGACATGAAAGATGACAGCA 2301 Query 363638 TCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAA 363697 | || || |||| |||||| || |||| ||| ||| | || ||||| | || || || | Sbjct 2300 TTGATGGCATCTATGACACGCTCAAGACTTGCGCTATGATCTCCAAAATGGCTGGTGGCA 2241 Query 363698 TTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGA 363756 |||| | | ||| |||| || || | | ||||||| |||||| || Sbjct 2240 TTGGCCTCAATGTTCACCGAATTCGGGCTACTGG-CTCTTACATTGCCGGCACCAACGGC 2182 Query 363757 TACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGAC 363816 ||| ||||| || || || ||||| || || || |||| ||||| | ||||| ||| Sbjct 2181 ACCTCCAATGGCCTTGTGCCTATGCTCCGGGTCTTCAACAACACTGCCCGCTACGTTGAC 2122 Query 363817 CAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGAT 363876 || ||||| ||||| || || || || || || || || || || | || Sbjct 2121 CAAGGTGGCAATAAGCGTCCTGGTGCCTTCGCCATTTACCTTGAACCCTGGCACTCAGAC 2062 Query 363877 ATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGAT 363936 | |||||||| || || ||||| || ||| || |||||||| | ||||| |||||| Sbjct 2061 GTCTTTGAGTTCCTCGATCTCCGTAAGAACCATGGCAAAGAGGAGGTTCGTGCCCGTGAT 2002 Query 363937 CTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAAT 363996 || ||| || |||||| || | || | || |||||||| || ||| | | | Sbjct 2001 CTTTTCCTCGCTCTTTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAAAATGGCGAG 1942 Query 363997 TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACT 364054 ||| ||||| | || || | || || || || ||| |||| || ||||| ||| || | Sbjct 1941 TGGACACTCATGTGTCCTAATGAGTGCCCTGGCCTTGCCGACTGCTATGG--TGAGGAAT 1884 Query 364055 ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG---ACAATTCCCG 364111 || || | ||||| ||||| || |||||| |||| | ||| || || | Sbjct 1883 TTGAGGCATTGTACGAGAAGTACGAGAGGGAGGGCAAGG---GCAAGCGCACCATCAAGG 1827 Query 364112 CACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGT 364171 | || ||||| |||| | ||| | || | |||| |||||| || | || | ||| Sbjct 1826 CTCAAAAGCTTTGGTACTCGATCCTTGAGGCACAGACTGAGACTGGTAATCCATTCATGC 1767 Query 364172 TGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG- 364230 | ||||| || | |||||||| ||| ||||||| || |||||||||||| || |||| Sbjct 1766 TCTACAAGGACGCTTGCAACCGTAAGAGCAACCAGAAGAACCTTGGTACAA-TCCGCAGC 1708 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290 |||||| || || ||||| || || || | ||||| |||||| ||| || || ||| Sbjct 1707 TCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGACGAGGTTGCTGTTTGCAAC 1648 Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC---TTTTGACCACCAG 364344 ||||| || | || || | || ||| | | | |||| | | || ||| | || Sbjct 1647 CTTGCTTCTCTGGCTCTGTCTGCCTTTATCAACTACGATGATGCATGCTTCGACTTCAAG 1588 Query 364345 CATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAAT 364404 | || | || || ||| | || | |||||||| ||||| ||||||| || Sbjct 1587 AAGCTGCACGAAGTTACCCAAGTTGTGGTTCGCAATCTCAACAAGATTATCGATGTAAAC 1528 Query 364405 TATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATTGGTC 364459 | ||||| | ||||| || || ||| || |||||||| || || || ||| Sbjct 1527 CACTATCCTGTCCCTGAGGCACGTAACAGC-----AACATGCGTCACCGGCCCATCGGTG 1473 Query 364460 TTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC-AAGATGGCATTT-GATTCGCC 364517 | ||||| || ||||||||||||| || | ||||| ||| || ||| || ||||| Sbjct 1472 TCGGTGTTCAAGGCCTCGCTGACGCCTTCCT--TGCTCTGCGATTGCCTTTCGAGTCGCC 1415 Query 364518 TGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGC 364577 ||| ||||||| || || ||| |||||||||| || || || || || | ||||| Sbjct 1414 TGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACTATTTACCACGCTGCTTTAACTGC 1355 Query 364578 TTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT-CTTT 364636 || ||| | || || |||| ||||| | | |||| |||||| | | Sbjct 1354 ATCTGTTGAGATCGCCAAGGTTGAGGGCCCATACTCGTCGTTCAAGGGTTCCCCTGCCTC 1295 Query 364637 CGCAGGGAAAATTC--CAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694 || ||| |||| || | ||| | ||||| |||| ||| | || ||| |||| Sbjct 1294 CGAAGG---TATTCTGCAATACGATATGTGGAACGTCAAGCCCAGCGACCTGTGGGACTG 1238 Query 364695 GGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753 ||| | || | | ||| | ||| ||||||| | ||||||| || | || | Sbjct 1237 GGACAGCCTCAAGGAGCAA-ATCAAGGAGCATGGCATTCGCAACAGTCTGCTGCTTGCCC 1179 Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813 |||||||||| || ||| ||||||| || || |||||||||||||| || || | || Sbjct 1178 CCATGCCCACTGCCAGTACATCACAGATTCTTGGCAACAACGAGTGCTTTGAGCCCTATA 1119 Query 364814 CAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACC 364873 | || | || ||||| || ||| | || || || | ||| || || | | Sbjct 1118 CTTCGAACATCTACCAGCGCCGTGTGCTTGCTGGCGAGTTCCAGGTTGTCAACCCATGGC 1059 Query 364874 TAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCG 364933 | | ||||||||| || | || || ||| || ||||| ||| ||||| | Sbjct 1058 TGCTGAAGGATCTTGTTGAACTTGGTCTTTGGTCAGATGCTATGAAAAACCGCATCATTG 999 Query 364934 CCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACA 364993 ||| || || || | |||||||| || | || || ||| | ||| | | |||| Sbjct 998 CCGAGAACGGCTCCATCCAGAACATCCCCAACATCCCTGACGATGTCAAGGCCCTGTACA 939 Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCGATCGCGGTG 365050 | || || ||||| || || ||| | |||| | |||||||| || || |||| Sbjct 938 AGACTGTTTGGGAGATCTCTCAGCG---CCAAATTGTGCAGATGGCGGCAGACCGTGGTG 882 Query 365051 CTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGC 365110 |||| ||| ||| |||||| | ||| | ||||| | || | | | |||| Sbjct 881 CTTTCATCGACCAGTCTCAGTCGCTCAACATCCACATGAAGGACCCCAGCATGGGCAAGA 822 Query 365111 TTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | || |||||||||| || ||||| || || ||||| || Sbjct 821 TCACCAGCATGCATTTCACAGGATGGAAGCTTGGACTCAAGACTGG 776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303255809379392