Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3618 145 7e-30 seq629 122 8e-23 seq3571 93.3 4e-14 >seq3618 Length=19201 Score = 145 bits (160), Expect = 7e-30 Identities = 915/1444 (63%), Gaps = 43/1444 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| |||||||| || | |||||| ||| || | ||| || || |||| Sbjct 1067 TTGACAACCTGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATGTTCGAAGTATAGGGC 1126 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||||| || || || | || | || ||||||||| || | | Sbjct 1127 TCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAGC 1186 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | ||| |||| |||||| | ||||| || | |||| |||| Sbjct 1187 AGCAGACTG--TTGCGAATGCCATGCTCCTTGATTTGCTCCTTGAGGCTGTCCCAGTCCC 1244 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGC-GGGG 145294 | || | ||| | |||| |||||| ||||| |||| ||| || ||| ||| |||| Sbjct 1245 ACAGGTCGCTGGGCTTGACGTTCCACATATCGTATTGCAGAATACCTTCGGAGGCAGGGG 1304 Query 145295 CTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGA 145354 ||||||| | | ||| |||| | ||||||| ||| | || | | Sbjct 1305 AACCCTTGAACG-ACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGATGCAGTTAAA 1363 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 || || ||||| ||||| || ||| |||||||| || ||| |||| Sbjct 1364 GCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCAGGCGACTCG 1423 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | |||| ||||| | || || || ||||| || || | || || ||||||||| Sbjct 1424 AAAGGCAATCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGGC 1483 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAAT 145533 || || ||||||||| | | ||| || |||||| | | |||| |||||||| Sbjct 1484 CGGTGACGCATGTTGCTGTTACGTGCCTCAGGGACAGGATAGTGGTTTAC-ATCGATAAT 1542 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 || || | || || || || || | |||| | ||| ||| | ||||| || | Sbjct 1543 CTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAGTCGAAGCA 1602 Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653 || || || | | | || | | || | || || | || ||||| || Sbjct 1603 TGCATCATCGTAGTTGATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTGCAAACAGCAAC 1662 Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCC 145713 ||| || | | || | | |||||| | ||| | ||| | ||| || || Sbjct 1663 CTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGGATTGTACC 1722 Query 145714 CAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCC 145773 || || | ||| || || || | |||||| |||||||||||||||||| | || || Sbjct 1723 AAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAATGGATTACC 1782 Query 145774 AGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGCACCTGCTG 145830 |||||| ||| | ||| | ||| | || | ||| | || || | || || Sbjct 1783 AGTCTCAGTCTGTGCCTCAAGGATCGA---GTACCAAAGCTTTTGAGCCTTGA--TGGTG 1837 Query 145831 CTGGTAGC---GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887 | | | || |||||| ||||| ||| ||| | ||||||| | ||| || Sbjct 1838 C-GCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTCACCATA 1896 Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947 ||| |||| ||||| || |||| || |||||||| || | ||| |||| || | Sbjct 1897 GCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATTTTTCTC 1956 Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCA 146007 ||| |||| ||| || | ||| || | ||| || ||| | | || || || | Sbjct 1957 GACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACGGGC---ACG 2013 Query 146008 ATCCTCAGC--ACCCATGTTTCGCTTC--AAATTAAGCACACT-ATAGATGTCCGCGTGC 146062 | |||| | ||||| ||| | | | || || | ||| | ||| ||| | |||| Sbjct 2014 AACCTCCTCTTTGCCATGGTTC-TTACGGAGATCGAGGA-ACTCAAAGACGTCTGAGTGC 2071 Query 146063 CACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGA 146119 || ||||||| || | ||||| ||| || || |||||||| ||||| |||| Sbjct 2072 CAGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTGCCACCTTGGTCAACGTAG 2131 Query 146120 CGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTA 146179 || | ||||||| ||||| || | ||| ||| | | ||| ||| |||||| || Sbjct 2132 CGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTG 2191 Query 146180 GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCC 146238 | || | ||| | || | | |||||||| | ||| | || || ||| Sbjct 2192 CCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTGAGGCCAATGCCACCAGCC 2251 Query 146239 GTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGC 146297 | ||||| || |||| |||| |||||| || |||||||| |||||||| || Sbjct 2252 AT-TTTGGAGATCATAGCGCAAGTC-TTGAGCGTGTCATAGATGCCATCAATGCTGTCAT 2309 Query 146298 TTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACA 146357 | ||| ||| |||||||| || | | ||| || || || || || ||| | Sbjct 2310 CTTTCATGTCGACAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAGCATTGAAGA 2369 Query 146358 ACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTCGATAG 146414 ||| || ||||| || || | || |||| ||| | || || || ||| Sbjct 2370 GCGTGGGTGAGGCGTGAGTGAAAAACTT---GCTCGACATGAGGTTGTAGGTCTCAATAA 2426 Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 || | ||| | ||| || ||||| | |||||||||||| | |||||| || || | Sbjct 2427 CGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGTGCTGTGGAC 2486 Query 146475 GCTC 146478 |||| Sbjct 2487 GCTC 2490 >seq629 Length=20836 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| |||||||| || |||||||| |||||| Sbjct 19475 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 19416 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||| |||||||| || Sbjct 19415 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 19356 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 19355 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 19296 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || ||||| || || || || ||||| |||||||| Sbjct 19295 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 19249 >seq3571 Length=7344 Score = 93.3 bits (102), Expect = 4e-14 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | |||||| ||||| ||||||||||| ||| ||| Sbjct 6127 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 6186 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||| |||||||| || || || || ||||| ||| ||| ||||| | | Sbjct 6187 TCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 6246 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || |||| || || || Sbjct 6247 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCAGTTAACGTCTTAAC-- 6304 Query 131225 AAATCTGC 131232 ||| |||| Sbjct 6305 AAAGCTGC 6312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471978248663040