Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq629 167 4e-36 seq3611 152 9e-32 seq3571 125 1e-23 seq5020 114 2e-20 seq5051 86.0 1e-11 seq4277 84.2 4e-11 >seq629 Length=20836 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | ||| || || ||||| || |||||||| || ||| Sbjct 19475 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 19416 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | |||||||| || ||| Sbjct 19415 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 19356 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 19355 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 19296 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || |||||||||||||| ||||| |||||||| Sbjct 19295 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 19249 >seq3611 Length=65567 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| || || ||||| || |||||||| || |||||| Sbjct 3511 CCACCGCGGAGACGAAGGACTAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3570 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | ||||| || || ||| Sbjct 3571 AGAGTGCGACCATCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGATCCGGGGGA 3630 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || |||||||||| ||||||| ||||| ||||| | || || || Sbjct 3631 ATGCCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATAGTGTCAGACGACTCAACC 3690 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || | ||||||||||| || ||||| Sbjct 3691 TCAAGAGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATTTGCAT 3737 Score = 147 bits (162), Expect = 4e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||| || ||||||||||| ||| Sbjct 3055 CCACCACGAAGACGGAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTATAGTCGCTC 3114 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| |||||||| || || | ||||| || || ||| Sbjct 3115 AGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGA 3174 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| ||| || || |||||||| ||| || || || Sbjct 3175 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCAATGGTGTC-GCTGGACTCGAC 3233 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || ||||| |||||||| || |||||||| Sbjct 3234 CTCCAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACAAAGATCTGCAT 3281 Score = 145 bits (160), Expect = 1e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || || || || |||||||| || ||||| Sbjct 3739 CCGCCACGGAGGCGGAGAACCAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAA 3798 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | ||||| || || ||| Sbjct 3799 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGA 3858 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||||| ||||||| ||||||||||| | ||||| || Sbjct 3859 ATGCCCTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAGGATTCGACC 3918 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||| || || |||| Sbjct 3919 TCAAGAGTGATGGTCTTGCCAGTGA 3943 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||| || |||||||| || ||| Sbjct 3283 CCACCACGAAGACGGAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGCTC 3342 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | ||||| || |||||| Sbjct 3343 AGAGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGTTGATCCGGTGGA 3402 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| ||| ||| ||||||||||| | ||| || || Sbjct 3403 ATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCAGATGACTCAACC 3462 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || || ||||||||||| || ||||| Sbjct 3463 TCGAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3509 >seq3571 Length=7344 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | ||||| || | |||||| || ||||| || Sbjct 6129 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 6188 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || |||||||| |||||||| || ||||| | |||||| ||| Sbjct 6189 AGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 6248 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || || || | ||||| || || Sbjct 6249 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCAGTTAACGTCTTAACAAA 6307 >seq5020 Length=23815 Score = 114 bits (126), Expect = 2e-20 Identities = 313/473 (66%), Gaps = 10/473 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || | || || |||||||||||| | |||||| | Sbjct 18978 CATGACACCAGCCTTCTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTAGTCTTGCCACC 18919 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| || ||||| || | || ||| || || Sbjct 18918 CAGGGAGATGTTCTCCATGAAGTCGAAAGGGTTGGTGGAGTTGTACACCTTCTCGTTGCC 18859 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || || || | ||||||||| |||||||| |||||||| ||| ||| | ||| Sbjct 18858 AAGAGCGACGAGGAGGCGGTCAGCGACGAACTCAATGTACTGCTGCATGAGGGTGGCGTT 18799 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | ||||| | ||||| | ||| |||||||||| | || || Sbjct 18798 CATGCCGAGGAGGGCACAGGGAAGAGCGTCAGTGAGGAACTCCTTTTCGTAAACCACGGC 18739 Query 10175 TTCCTCG--ACGATGCTC-TTTACC-ACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || | | || ||| | ||| | | ||| | ||||| || | || | Sbjct 18738 CTCAGTGATAATATCCTCAATGACCTGCTTGCTGGGGC----GGTTCTTCAGGTGGGAGT 18683 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||||| |||| | ||| || ||||| || || ||| | ||||||||| | Sbjct 18682 GAAGGAGACAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGA 18623 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 || ||||| |||||||| || || || |||||||| |||| ||| | ||| Sbjct 18622 AAGTGAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAAAGCACCGC 18563 Query 10351 AGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGGA 10402 ||| | || |||||| || ||| | |||| |||||||||| ||||||| Sbjct 18562 TGAAGAAAATACCCTCAACAGCA-GCGAAGGCAACGAGGCGCTGACCGAAGGA 18511 >seq5051 Length=36640 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||||||||| | ||| | || || ||||| | || || |||||| | || Sbjct 23289 GGGGAAGCCCTCGACCTGCTCGTTGTTGATGGCACGCATGAGAGTGGACTTGCCGGAACC 23230 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 |||||| ||| || ||||| | | || ||||||| ||| | || ||| || Sbjct 23229 GTTGGGGCCGCAAAGACCGTAGCGCTGGCCACGCTTGAGACGAAGGTGAGTCTGGTTGAG 23170 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||||||| |||| ||||| |||||||| ||| | ||| || |||||||||||||| Sbjct 23169 CAGGATCTTGGCACCGTAGGCGAGGGAGAAAGTGCAGTTGCAAAGATCCTCACCCTCCTC 23110 >seq4277 Length=24017 Score = 84.2 bits (92), Expect = 4e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033 ||| || |||||||||| |||||||||||| ||| | || || || |||| | || | Sbjct 17457 GGCGTAACGCCACTGGAGGTACTGGTTGGGCGTCTTCTCGAGATGCATCTCGACGTGCTC 17398 Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093 | |||||||| | ||| | || |||| ||| || |||||| || ||| Sbjct 17397 AAGGGCATGCTGCTTGATGTAGCCGATACGCAGGTTAGGGTGCTTCTCAACCTTGCCAGT 17338 Query 225094 AGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGG 225153 || || | |||||| ||||| | |||||| || || | ||| || ||||| ||||| Sbjct 17337 GGTGGGAATAGTCTCGCCAGTGAGAAGCTTGATTAGGGTGGACTTTCCAGCACCGTTGGG 17278 Query 225154 GCCAATCACGCCAATCCGGGATGA 225177 |||||| | | | | ||||| || Sbjct 17277 GCCAATGATGGCGACTCGGGAGGA 17254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921554937240320