Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_009016.1 Length=38197 Score E Sequences producing significant alignments: (Bits) Value seq1898 183 7e-42 >seq1898 Length=432 Score = 183 bits (202), Expect = 7e-42 Identities = 305/435 (70%), Gaps = 8/435 (2%) Strand=Plus/Minus Query 14787 CCGTCCACCATCGCCATGGGCGCAGTGGCCGCGGTGAAGCCGTGGGAGTCTCCAGGCAAC 14846 ||||| | | | ||||| | ||| | ||| ||| |||| |||||| || |||||| Sbjct 431 CCGTCGAGCCTGGCCATCGCCGCGCTCGCCAAGGTCAAGCAATGGGAGAGCCCGGGCAAC 372 Query 14847 CAAGGCGTGCTGATTC--AGGATGTGGCTCGAGTCATCGACTACAACATCCTGGACAAGA 14904 || || | || || | |||| || | || | | || ||||||||||| |||| | Sbjct 371 CA-GGTGACCT-ATGCCGAGGACGTTTCGCGCACCGTGGAATACAACATCCTCGACACGT 314 Query 14905 GCACCGAGGGTGACCTGCTCAACCGTAACGGCGTGAGCTACTTTGCTCGCACTAGCATGG 14964 |||||| || |||||||||||||| ||||||| ||||||| || || || | | | | Sbjct 313 CCACCGAAGGCGACCTGCTCAACCGCTACGGCGTCAGCTACTACGCCCGGACCATCCTCG 254 Query 14965 GCGGCTTTAGTCTTATCGGCAACCGCACGGTGACGGGCAAGTTTATCTCGTTTGTCGGCC 15024 | ||||| || | ||||||||| | | || |||||| | ||| | ||||||| Sbjct 253 GTGGCTTCTCGCTGCTGGGCAACCGCTCCATTACCGGCAAGATCATCAGCTACGTCGGCC 194 Query 15025 TCGAGGACGCCATCGCTCGCAAGCTGG--AAGCAGCCAGCCAGCGTGCTATGTCCAAGCA 15082 | ||||| |||||| |||||||||| ||| || ||||| || ||| | ||| | Sbjct 193 TGGAGGATGCCATCAGCCGCAAGCTGGTCAAG--GCTGGCCAGAAAGCCATGGCGAAGAA 136 Query 15083 GCTGACCAAGAGCTTCATGGAGCAGGAAATCAAGAAGATTAACCTGTTCATGCAAGACCT 15142 ||||||||| ||||||||| ||||| ||||| || ||| | ||||| ||| Sbjct 135 CCTGACCAAGTCCTTCATGGACCAGGAGGTCAAGCGCATCAACGACTGGCTGCAAACCCT 76 Query 15143 TGTCGCGGCTGAAATTATCCCAGGCGGTGAAGTGTACCTGCACCCGACTCTTAACACGGT 15202 || || | |||| ||||| ||||| ||||||||||||||| || |||| || Sbjct 75 GGTGGCCGACGAAACCATCCCGGGCGGCAGCGTGTACCTGCACCCGGAACTCAACAGTGT 16 Query 15203 CGAGCGGTATAAGAA 15217 |||| ||| ||||| Sbjct 15 CGAGAAGTACAAGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122100308554048