Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3618 253 4e-62 seq5020 250 5e-61 >seq3618 Length=19201 Score = 253 bits (280), Expect = 4e-62 Identities = 1202/1877 (64%), Gaps = 77/1877 (4%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||| | || ||| | || |||| || | ||||||||||||||| |||||||||| Sbjct 729 TGAACTGAATCGGAGCGGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCAGTCTTGAGTC 788 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 || ||| | || |||||| || | ||| ||| ||| ||| || Sbjct 789 CAAGCTTCCATCCTGTGAAATGCATGCTGGTGATCTTGCCCAT-----GCT--GGG--GT 839 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 ||| || || |||||| ||||| |||||||| ||| | | || ||||| | Sbjct 840 CCTT---CATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCG 896 Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 |||| | | | |||||| ||||| | | |||||||| | || ||||| | Sbjct 897 CCATCTGCACAATTTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGACAT 956 Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040 || |||| ||||||||| | ||||| || | | | |||| || | || Sbjct 957 CGTCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCA 1016 Query 244041 TGTTATCGTTCCACAGGCCCAAGCGCTCCA-GCGCCTCGACCAGGTGCCTGTTCACCACC 244099 | ||| ||| || || ||| | || | ||| | ||| ||| || ||| Sbjct 1017 TAGCATCTGACCAAAGACC-AAGTTCAACAAGATCCTTCAGCAGCCATGGGTTGACAACC 1075 Query 244100 TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTT-GCTGCTGAGCGGCTCGATGCT 244158 || ||||| || | ||||| ||||||||||||| ||| | | || ||||| | || Sbjct 1076 TGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATGTTCGAAGTATAG-GGCTCAAAGCA 1134 Query 244159 CTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACT 244218 ||| ||||||| || ||||| | || || ||||| |||||||| | | ||||||||| Sbjct 1135 CTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACT 1194 Query 244219 GTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGA 244278 ||| | | ||| ||| || ||| | |||| || ||||||||||| Sbjct 1195 GTTGCGAATGCCATGCTCCTTGATTTGCTCCTTGAGGCTGTCCCAGTCCCACA------- 1247 Query 244279 GAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCT 244338 |||| | | |||| | |||||| || | ||||| | || | | | | ||| Sbjct 1248 --GGTCGCTGGGCTTGACGTTCCACATATCGTATTGCAGAATACCTTCGGAGGCAGGGGA 1305 Query 244339 GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCTCGTCGAGGG 244397 |||| | | | || ||| || || || || ||| | || | ||| | || | | Sbjct 1306 ACCCTTGAACGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGATGCAGTTAAAG- 1364 Query 244398 CGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGA 244457 | |||| ||| || ||||| |||||| |||||| | || || |||| |||| || Sbjct 1365 CAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCT-----CAGGCGA 1419 Query 244458 AGGGGATGCCCATC----ATCATG-AAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 | | | | ||| | || | ||| |||| || || || || || |||| ||||| Sbjct 1420 CTCGAAAGGCAATCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGAT 1479 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||| | ||| ||| ||||| | || || || || || || ||| | ||||| Sbjct 1480 GGGCCGGTGACGCATGTTGCTGTTACGTGCCTCAGGGACAGGATAGTGGTTTACATCGAT 1539 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | ||||||||| ||||| | | || || ||| |||| || |||||| | Sbjct 1540 AATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAGTCGAA 1599 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | | | ||| ||| | || | | || || || || | || || Sbjct 1600 ---GCATGCATCATCGTAGTTGATAAAGG---CAGAC------AGAGCCAGAGAAGCAAG 1647 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 |||||| || || ||||| || | | |||| || ||||| ||||| ||||| Sbjct 1648 GTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGA 1707 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 || ||| || || |||| || || ||| ||| |||||| |||||||||||||| Sbjct 1708 GCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAG 1767 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 |||||| || || ||||| ||| || | |||| || ||| || | ||| Sbjct 1768 CATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTTTGAGC 1827 Query 244873 CTTGACCGTCCTGCGAGCC-TTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 ||||| || | || ||| |||||||| |||||| ||||| ||||| || | Sbjct 1828 CTTGATGGTGC-GCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATT 1886 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 | || || ||| | ||||| |||||| || |||||||| ||||||||| Sbjct 1887 CCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGC 1946 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 | | || ||| | || ||||||||| || || ||||| || || |||| || || | Sbjct 1947 CATTTTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCAC 2006 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 || | ||| || |||| |||||| | || || | || ||||||||||| Sbjct 2007 GGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTG 2066 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||||| || | ||| | |||| ||| || || ||||| ||||| || ||||| | Sbjct 2067 AGTGCCAGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTGCCACCTTGGTCAA 2126 Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 | | | || | |||||||| || || ||||||| | ||| || ||| |||| Sbjct 2127 CGTAGCGGGC-AGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCG 2185 Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAG 245286 |||||||| ||||| | ||| | ||| || | | ||| |||| ||| | Sbjct 2186 TTGGTGCCGGCAATGTAAGAGCCAGTAGCCC-GAATTCGGTGA---ACATTGAGGCCAAT 2241 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 || || || |||||||| | ||||| |||||| ||||| ||||| || || Sbjct 2242 GCCACCAGCCATTTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAAT 2301 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG-GGGCTGCACG 245405 |||||| ||||||| || |||||||| || || |||| | ||||| ||| | | | Sbjct 2302 GCTGTCATCTTTCATGTCGACAAGAAAGCAAGACGATAGCT-GAGCTTGAGGGGTACCAG 2360 Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCT 245465 ||||| || ||||| |||||| || || | |||||| | || ||| |||| Sbjct 2361 CATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCT 2420 Query 245466 GGAGCA-GAGCGTCGATGTTGTCGCCGTGGAT--CTGCAG-GGCGCACCTCATGAGGGTG 245521 | | | || || || ||||| || ||| | ||| | ||| | | || | || Sbjct 2421 CAATAACGCGC-TCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCA---TG 2476 Query 245522 TGCTG-GGGCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGC 245578 ||||| || || || | || || | | | |||||||| ||| || ||||| || Sbjct 2477 TGCTGTGGACGCTCAACAATCTTGCCGTTGAG---CTTGAGCAGGTATGATCGCTCCAGG 2533 Query 245579 GTCTTGAACCCAAAGTA 245595 |||||||| |||||||| Sbjct 2534 GTCTTGAAGCCAAAGTA 2550 >seq5020 Length=23815 Score = 250 bits (276), Expect = 5e-61 Identities = 605/910 (66%), Gaps = 76/910 (8%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| |||||||| || || || Sbjct 18066 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAAATCGATCTC 18125 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415 |||| || || |||| | || | |||| || |||| |||| ||| || Sbjct 18126 TCCAAAGATCTTCACGACTGGAACA-ACCGCCTGAACGATGACGAGAAGTACTTCATCTC 18184 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| |||| |||||||| |||||||||||||| ||||| |||||||||| | Sbjct 18185 TCACATCTTGGCTTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTGGTTGAGCG 18244 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| || ||||| | |||||| |||||||||||||| |||||||| || Sbjct 18245 CTTCAGCGCCGAAGTGCAAGTCCCTGAGGCTCGCTGCTTCTACGGTTTCCAGATTATGAT 18304 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||| | ||| || |||| |||||| ||| | || Sbjct 18305 GGAGAACATTCACTCCGAGACATACTCTCTCCTGATCGACACATACATCAAGGA-ACAGT 18363 Query 42596 C-GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA--------TGCC------------ 42634 | | |||| || ||||| ||||| || || | |||| Sbjct 18364 CTCAACGTACTTATCTCTTCAACGCCATTGACACCAGTGAGTATTGCCATTACCCGAATC 18423 Query 42635 --------------------------------CTGCATCAAGAAGAAGGCGGACTGGGCG 42662 |||||| |||||||| |||||||| Sbjct 18424 ACCTGACGTAGTCACTAATATCCTCCAGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCT 18483 Query 42663 CTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 ||||| ||||| | | | | || || | ||||| || | || || ||||| | || Sbjct 18484 CTCAAGTGGATTG-CTGACAAGAACTCATCCTTCGGTCAGCGCCTCGTTGCCTTCGCTGC 18542 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780 || ||||| || |||||| || || ||||| |||||||||||||||||| || || Sbjct 18543 TGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGG 18602 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 || ||||| || ||||| ||||| ||||| || ||| | || ||||| || || | Sbjct 18603 CCTC-ATGCCTGGTCTCACTTTCTCCAACGAGCTTATCTCTCGTGATGAGGGTCTTCACA 18661 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGG 42900 ||||||||||| ||||| ||| |||||| | | || |||| | | ||| || Sbjct 18662 CTGACTTTGCCTGTCTCCTTCACTC---CCACCTGAAGAAC-CGCCCCAGCA--AGCAGG 18715 Query 42901 TC---CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957 || || || ||||| |||||||||| ||| |||||||||||||| | | | Sbjct 18716 TCATTGAGGATATTATCACTGAGGCCGTGGTTTACGAAAAGGAGTTCCTCACTGACGCTC 18775 Query 42958 TGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTC 43016 | ||| ||| |||| ||||||||||| | ||||||| ||||||| ||| |||| Sbjct 18776 TTCCCTGTG-CCCTCCTCGGCATGAACGCCACCCTCATGCAGCAGTACATTGAGTTCGTC 18834 Query 43017 GCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTT 43075 || |||| ||||| || | ||| || | | |||||| | | ||| || Sbjct 18835 GCTGACCGCCTCCTCGTCGCTCTTGGCAACGAGAAG-GTGTACAACTCCACCAACCCTTT 18893 Query 43076 CGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGC 43135 |||||| |||||||||||||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct 18894 CGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACTAACTTCTTCGAGAAGCGTGTCGC 18953 Query 43136 CGACTACCAG 43145 |||||||||| Sbjct 18954 CGACTACCAG 18963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944270074370560