Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_009234.1 Length=35741 Score E Sequences producing significant alignments: (Bits) Value seq5617 95.1 3e-15 >seq5617 Length=361 Score = 95.1 bits (104), Expect = 3e-15 Identities = 178/257 (69%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 33328 TACGCGCGGTCGAGCTTCACGTCATACAGGTTGATCGC--GAATTCCGGGCCGTTGTAGC 33385 || ||||| | |||||| | ||| || ||||| |||| | | ||||||||||||||| Sbjct 29 TAGGCGCGCTGGAGCTTGATGTCGTATAGGTT--TCGCTGGTAGTCCGGGCCGTTGTAGA 86 Query 33386 CTTCCGCGAACGTCGCCCACTTCCGGGCACGAAGCGCCGCTAGCAGCTTCTTGTCGGCCG 33445 |||||| | ||| || ||||| | |||| |||| | ||||| | Sbjct 87 GCGTCGCGAATTCGGACCATTTGCGGGCCTTCAACGCCTTATGCAGAACCGGGTCGGTCT 146 Query 33446 CGACGTACCGCACGAACGCGTCGAGGTGCTCGGCTTCGCCCAGCTC-CATACGGGACACG 33504 || | | |||||||||||| ||| |||| | ||||| ||| | ||| ||| Sbjct 147 GGATGAAACGCACGAACGCGGCGAACTGCTGAGACTCGCC-AGCGCTCATGTCCTCGACG 205 Query 33505 AATTCGTCGACGCTCGCGTAACCCAGGCGTTTCCAGTGATACGCCATGATCTGGAACGCG 33564 ||| | ||||| || || |||||||| | ||||||| || ||||||||||||| || Sbjct 206 AATGTCTGCACGCTGGCATAGCCCAGGCGCTGCCAGTGAAACCCCATGATCTGGAATGCA 265 Query 33565 CCCCAGCTCGCGGACTC 33581 |||||| |||||||| Sbjct 266 CCCCAGGAGGCGGACTC 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114241655082816