Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq5020 131 4e-25 >seq5020 Length=23815 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 || ||||| || || || | |||||||||| ||| | |||||| |||| || Sbjct 18727 ATTATCACTGAGGCCGTGGTTTACGAAAAGGAGTTCCTCACTGACGCTCTTCCCTGTGCC 18786 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||| | |||||| |||||||| || ||||| || |||||| | Sbjct 18787 CTCCTCGGCATGAACGCCACCCTCATGCAGCAGTACATTGAGTTCGTCGCTGACCGCCTC 18846 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| ||||| | ||||| ||||||||||||| ||||| || | ||| |||||| Sbjct 18847 CTCGTCGCTCTTGGCAACGAGAAGGTGTACAACTCCACCAACCCTTTCGACTTCATGGAG 18906 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726 ||| || || || || |||||||||||||| ||||||||| Sbjct 18907 AACATCTCCCTGGGTGGCAAGACTAACTTCTTCGAGAAGCGTGTC 18951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102797250913600