Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq5020 131 4e-25
>seq5020
Length=23815
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|| ||||| || || || | |||||||||| ||| | |||||| |||| ||
Sbjct 18727 ATTATCACTGAGGCCGTGGTTTACGAAAAGGAGTTCCTCACTGACGCTCTTCCCTGTGCC 18786
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | ||||||||| | |||||| |||||||| || ||||| || |||||| |
Sbjct 18787 CTCCTCGGCATGAACGCCACCCTCATGCAGCAGTACATTGAGTTCGTCGCTGACCGCCTC 18846
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
|| |||| ||||| | ||||| ||||||||||||| ||||| || | ||| ||||||
Sbjct 18847 CTCGTCGCTCTTGGCAACGAGAAGGTGTACAACTCCACCAACCCTTTCGACTTCATGGAG 18906
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726
||| || || || || |||||||||||||| |||||||||
Sbjct 18907 AACATCTCCCTGGGTGGCAAGACTAACTTCTTCGAGAAGCGTGTC 18951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102797250913600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |