Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3618 152 6e-32 >seq3618 Length=19201 Score = 152 bits (168), Expect = 6e-32 Identities = 852/1346 (63%), Gaps = 26/1346 (2%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| || |||||||| || ||||||| | | |||||| || Sbjct 761 CGCAGGTAGTACATGCCAGTCTTGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTGGTG 820 Query 113657 AACTTGGAGAGTGTTGGACTT-TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 | |||| | || ||| | | |||| || ||| | || || || |||||||| Sbjct 821 ATCTTGCCCA-TGCTGGGGTCCTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATGAA 879 Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGT 113772 ||||| || |||||||| | |||| | || ||| ||||| ||||| Sbjct 880 AGCACCACGGTCTGCCGCCATCTG---CACAATTTGGCGCTGAGAGATCTCCCAAACAGT 936 Query 113773 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGC 113832 |||| ||| ||| | ||| || ||||| | ||| || ||||||||||| | | Sbjct 937 CTTGTACAGGGCCTTGACATCGTCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTC 996 Query 113833 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 113892 | ||| | | |||||| | | |||||| ||||||| | ||||||| || Sbjct 997 GGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGACCAAGTTCAACAAGATCCTTCAG 1056 Query 113893 GAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950 || ||| | ||||||| ||||| || || || || | | | ||||| || Sbjct 1057 CAGCCATGGGT--TGACAACCTGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATGTTC 1114 Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010 | || || |||||||||||||| ||||| || | || || | || ||| |||||| Sbjct 1115 GAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGC 1174 Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070 ||||| || | || || ||||| || | || | ||| | || | ||||||||| | Sbjct 1175 ATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGATTTGCTCCTTGAGGCTG 1234 Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 |||||||| | | | | || | | ||||||||| | || || ||||||| | Sbjct 1235 TCCCAGTCCCACAGGTCGCTGGGCTTGACGTTCCACATATCGTATTGCAGAATACCTTCG 1294 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC-GGAGCT 114189 ||||| || || |||| || | | ||||||||||||||||| || | || || | Sbjct 1295 GAGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGAT 1354 Query 114190 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 114249 || | || ||||| || || |||||||| || | || | | ||||| Sbjct 1355 -GCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTC 1413 Query 114250 GTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGA 114308 || || || | | || ||| | || || | || ||||| ||||| ||||||| Sbjct 1414 AGGCGACTCGAAAGGCAATC-GCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGA 1472 Query 114309 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAAT 114365 || || || || || | ||| || || || || ||| || ||||| | Sbjct 1473 CACCGATGGGCCGGTGACGCATGTTGCTGTTACGTGC---CTCAGGGACAGGATAGTGGT 1529 Query 114366 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 114425 | |||||||| | | || ||||| ||||| | || | ||| || ||||| | Sbjct 1530 TTACATCGATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCT 1589 Query 114426 CGTAATCAAAAC-TGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 114484 | | || || | ||| | || | |||| | | || || || | || || || Sbjct 1590 TGAAGTCGAAGCATGC-ATCATCGTAGTTGATAAAGGCAGACAGAGCCAGAGAAGCAAGG 1648 Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544 || || |||| ||| || | ||| ||||| || || || || || | || || Sbjct 1649 TTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAG 1708 Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604 || || || || | |||||| || || ||| ||| || || |||||||| ||| Sbjct 1709 CTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGC 1768 Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGC 114663 ||| |||| | || ||||| || || | || || || | | ||| | | | | | | Sbjct 1769 ATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTTTGAGCC 1828 Query 114664 TGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 114723 | | | ||| ||| | |||||| ||||||||| ||| | || ||||| || Sbjct 1829 TTG-ATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTC 1887 Query 114724 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 114783 ||||| | || | || || || || || || || | ||| | ||| | || Sbjct 1888 CTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCC 1947 Query 114784 ACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG 114843 | | ||| ||||||||||||||||| || || ||||| ||||| ||| ||||| || Sbjct 1948 ATTTTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACG 2007 Query 114844 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903 ||| | || || | || || || ||| | || | || || | || || | Sbjct 2008 GGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGA 2067 Query 114904 GTGCCACGGTTCCAGGTACACCGCGA 114929 |||||| ||||| ||||| | |||| Sbjct 2068 GTGCCAGGGTTCAAGGTAAATGGCGA 2093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597309873716480