Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq1898 219 1e-52 >seq1898 Length=432 Score = 219 bits (242), Expect = 1e-52 Identities = 219/284 (77%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 15083 TGGCAAAGCCCCGGCAACCAGGGCGTGTTGATCCAGGGCGTCGCGCGCCACGTGGATTAC 15142 ||| | ||||| |||||||||| | | ||| ||| ||||| |||||| ||| Sbjct 389 TGGGAGAGCCCGGGCAACCAGGTGACCTATGCCGAGGACGTTTCGCGCACCGTGGAATAC 330 Query 15143 AACATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATCAGCTACTAC 15202 ||||| ||||||| ||| || || |||||||||||||||||||||||| ||||||||||| Sbjct 329 AACATCCTCGACACGTCCACCGAAGGCGACCTGCTCAACCGCTACGGCGTCAGCTACTAC 270 Query 15203 GCGCGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACCGGCGAGTTT 15262 || || |||| ||| || || ||||||||| | ||||||||| | | |||||| || | Sbjct 269 GCCCGGACCATCCTCGGTGGCTTCTCGCTGCTGGGCAACCGCTCCATTACCGGCAAGATC 210 Query 15263 ATCTCGCACGTAGGCCTTGAAGACGCCATCGGTCGCAAGATCGTCGGCGCGTCGCAGAAG 15322 ||| |||| ||||| || || |||||| | |||||| | ||| || ||||| Sbjct 209 ATCAGCTACGTCGGCCTGGAGGATGCCATCAGCCGCAAGCTGGTCAAGGCTGGCCAGAAA 150 Query 15323 GCCATGGCGCAGAACTTGACCAAGAGCTTCATGGAGCAGGAGGT 15366 ||||||||| ||||| |||||||| ||||||||| |||||||| Sbjct 149 GCCATGGCGAAGAACCTGACCAAGTCCTTCATGGACCAGGAGGT 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125453675344704