Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq3110 122 4e-23 >seq3110 Length=303 Score = 122 bits (134), Expect = 4e-23 Identities = 193/276 (70%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 66259 TCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCA 66318 ||||||| || ||||| | | |||||| | ||| || || ||||||||||| |||||| Sbjct 31 TCGAAGGTGAAATCGGCGTCATGCACGTGGTCCTCCAGGCGCGCCTGATGTCCCAGGCCC 90 Query 66319 TGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGC 66378 |||||||| | ||||| | ||| | | ||||| || | | | || ||| Sbjct 91 TGCGCAAGATCACCGGTAACATTAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGA 150 Query 66379 TGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGG 66438 | || |||||||||| || | | ||||| | ||||||||||||||||| | Sbjct 151 TCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGTAA---ACCACCACCGGTGGTAACG 207 Query 66439 CTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAG 66498 | ||| |||||||||||||| || |||| ||||| | | || | | |||||||| Sbjct 208 CGCTGAAGTTCTACGCCTCGGTTCGCCTGGACATCCGCCGTACCGGTGCGGGGAAGGAAG 267 Query 66499 GCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGG 66534 ||||||| | ||||||| | || ||||| |||| Sbjct 268 GCGATGAAGTGGTCGGCAGCGAAACCCGCGTCAAGG 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242453094887552