Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3457 260 2e-64 >seq3457 Length=36760 Score = 260 bits (288), Expect = 2e-64 Identities = 483/704 (69%), Gaps = 10/704 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||||||||| | ||| || || || || || | ||||| || |||||||| Sbjct 13761 TCGAAGTCTTCACCACCGAGGTGAGTGTCGCCAGCAGTGGACTTGACCTCGAAGATACCC 13820 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | |||||||| || ||||||||||| || || || ||||| ||| Sbjct 13821 TCCTCAATGGTCAGGAGGGAAACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACG 13880 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| ||||||||||| || || || || || || || || Sbjct 13881 TTGCGCTCGCCCTCAACCTTCTTGTCGAGACCGTAGGCAATGGCGGCGGCAGTGGGCTCG 13940 Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || |||| || |||| ||||||||||| || | || || || || || || || Sbjct 13941 TTGATGATACGGAGGACA-TTCAGGCCAGCGATGAGACCGGCGTCCTTGGTAGCCTGACG 13999 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || ||||| |||||||| || || || ||||| |||| |||| | ||||| Sbjct 14000 CTGAGAGTCGTTGAAGTAGGCAGGAACGGTGACGACAGCGTTGTTGACAGTGCCGCCGAG 14059 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | || ||| | || ||| ||||| |||||||| || |||||||| || | | Sbjct 14060 GTAAGCCTCAGCGGTCTCACGCATCTTGGTGAGAACCATGGAGGAAATCTCCTCGGGTGT 14119 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC-AGCACCGG 7874 || || || ||||| || || || || || || | ||| || || | | | Sbjct 14120 GAAGGTCTTGGTCTCACCCTTGAACTCGACCTCGATGACGGGCTT----GCTACCCTTGT 14175 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 || || ||| | | | | ||||||||| | ||||||| | | || ||||| | Sbjct 14176 CGACAATCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCTGGATCGCTGAACTTGC 14235 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 || || |||||||| ||||| || || ||||| | ||||||||||| ||||||| Sbjct 14236 GGCCAATGAGACGCTTGGCATCGAAGACAGTGTTCTGAGGGTTCATGGCGACCTGGTTCT 14295 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || ||||| | ||| || | || || || |||||| | || || || | Sbjct 14296 TGGCGGCATCACCGATCAAACGCTC---GGTGTCGGTGAAAGCGACGAAGGAGGGTGTGG 14352 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || |||||||| ||||| || || || || | | ||| || |||| Sbjct 14353 TACGGTTACCCTGGTCGTTGGCAATGATATCACATCGATCCTCGCGGAAGATACCCACGC 14412 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT 8158 | || ||||| || || | ||| ||||||| || ||| |||| Sbjct 14413 AGGAGTACGTGGTACCCAGATCGATACCGACGGCGGGAGCCATT 14456 Score = 122 bits (134), Expect = 1e-22 Identities = 538/850 (63%), Gaps = 25/850 (3%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 |||||||| || || ||||| || ||||| | ||| ||||| || || || || Sbjct 12807 TCATCTTCCTCCTTGTACTTCTCAGCATCAGCAAGCATGCGCTCAATCTCCTCCTTGGAC 12866 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| || || |||||| | ||| || || | | |||| || | Sbjct 12867 AGGCGACCCTTGTCATTGGTGATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCAACG 12926 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| || |||| ||||| || ||||||| |||||| | || | ||| || || | Sbjct 12927 GCAGAGACGTTCAGGATACCGTTGGCATCAAGATCGAAAGTGACCTCAATCTGAGGGACA 12986 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | |||||||| || | || || | || || | |||| ||| | Sbjct 12987 CCACGAGGAGCAGGCGGAATACCAGTGAGCTCGAACTTGCCGAGGAGGTTGTTGTCCTTG 13046 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866 | || ||| || || ||| |||| | || | ||||| || || ||||| Sbjct 13047 GTGCGCTGACGCTCGCCCTCAAAGACCTGGATAAGGACACCG--GGCTGGTTATCGGAGA 13104 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || ||||||| | | ||||| | || || || || || | || || | || Sbjct 13105 AGGTGGAGAAGACCTCGGCCTTCTTGGTGGGGATAGTGGTGTTACGGGGGATGAGTTTGG 13164 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||| || ||||| ||| |||| || | || || | | || || ||| | || Sbjct 13165 TCATCATGCCACCAGCAGTCTCGATACCCATGGAGAGGGCAGCGACATC---GAGAAGCA 13221 Query 6987 GG-TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGA 7034 || ||| | || || ||| |||| | | ||||| || |||| Sbjct 13222 GGATCTCG------TTGGTGGACTTGGAAGAAGTGTCACCGGAGAGAATGGCAGCCTGGA 13275 Query 7035 CCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGT 7094 | | || || || ||||| |||||||||||||| || | || | || || |||| Sbjct 13276 CGGCGGCACCATAGGCGACGGCCTCATCGGGGTTGATGGAGCGGTTGGGCTCCTTGCCGT 13335 Query 7095 TAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAA 7154 | || || || | | | | || | ||||| || || || |||||||| | | Sbjct 13336 TGAAGTAGTCGGTAATGAGCTTCTGGACACGGGGGATACGGGTGGAACCACCGACGAGGA 13395 Query 7155 CGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTT 7214 |||| || | || | || |||||||| | || | || || ||||| | Sbjct 13396 CGATCTCGTGAACCTGGCTCTTGTCGATCTTGGCATCACTGAGGACACGGTCCACAGGCT 13455 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 || |||||| | ||| || || ||||| || || |||||||| || || | Sbjct 13456 GGATGGTAGAACGGAAAAGATCCTGGCAAAGCTCCTCGAAGCGGGCACGGGTGATTGAGG 13515 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | ||||| || | ||| ||| | | |||||||| |||||||| || || || | |||| Sbjct 13516 TGTAGAAGTCGATGCCCTCGAAGAGAGAATCAATCTCAATGGTAGTCTGAGCGGAGGAAG 13575 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 | | || ||||| || ||||| || || || || | ||| ||||||||||| | ||| Sbjct 13576 ACAGGGTGCGCTTGGCACGCTCGCAAGCAGTGCGGAGACGGCGAAGGGCACGAGCGTTGG 13635 Query 7395 CGGAAATATC 7404 ||||| ||| Sbjct 13636 TGGAAAGATC 13645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635086308279040