Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq3457 260 2e-64
>seq3457
Length=36760
Score = 260 bits (288), Expect = 2e-64
Identities = 483/704 (69%), Gaps = 10/704 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| ||||||||||| | ||| || || || || || | ||||| || ||||||||
Sbjct 13761 TCGAAGTCTTCACCACCGAGGTGAGTGTCGCCAGCAGTGGACTTGACCTCGAAGATACCC 13820
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | |||||||| || ||||||||||| || || || ||||| |||
Sbjct 13821 TCCTCAATGGTCAGGAGGGAAACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACG 13880
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| ||||||||||| || || || || || || || ||
Sbjct 13881 TTGCGCTCGCCCTCAACCTTCTTGTCGAGACCGTAGGCAATGGCGGCGGCAGTGGGCTCG 13940
Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| || |||| || |||| ||||||||||| || | || || || || || || ||
Sbjct 13941 TTGATGATACGGAGGACA-TTCAGGCCAGCGATGAGACCGGCGTCCTTGGTAGCCTGACG 13999
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| || ||||| |||||||| || || || ||||| |||| |||| | |||||
Sbjct 14000 CTGAGAGTCGTTGAAGTAGGCAGGAACGGTGACGACAGCGTTGTTGACAGTGCCGCCGAG 14059
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
|| | || ||| | || ||| ||||| |||||||| || |||||||| || | |
Sbjct 14060 GTAAGCCTCAGCGGTCTCACGCATCTTGGTGAGAACCATGGAGGAAATCTCCTCGGGTGT 14119
Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC-AGCACCGG 7874
|| || || ||||| || || || || || || | ||| || || | | |
Sbjct 14120 GAAGGTCTTGGTCTCACCCTTGAACTCGACCTCGATGACGGGCTT----GCTACCCTTGT 14175
Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934
|| || ||| | | | | ||||||||| | ||||||| | | || ||||| |
Sbjct 14176 CGACAATCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCTGGATCGCTGAACTTGC 14235
Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994
|| || |||||||| ||||| || || ||||| | ||||||||||| |||||||
Sbjct 14236 GGCCAATGAGACGCTTGGCATCGAAGACAGTGTTCTGAGGGTTCATGGCGACCTGGTTCT 14295
Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054
| || || || ||||| | ||| || | || || || |||||| | || || || |
Sbjct 14296 TGGCGGCATCACCGATCAAACGCTC---GGTGTCGGTGAAAGCGACGAAGGAGGGTGTGG 14352
Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114
| || || || |||||||| ||||| || || || || | | ||| || ||||
Sbjct 14353 TACGGTTACCCTGGTCGTTGGCAATGATATCACATCGATCCTCGCGGAAGATACCCACGC 14412
Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT 8158
| || ||||| || || | ||| ||||||| || ||| ||||
Sbjct 14413 AGGAGTACGTGGTACCCAGATCGATACCGACGGCGGGAGCCATT 14456
Score = 122 bits (134), Expect = 1e-22
Identities = 538/850 (63%), Gaps = 25/850 (3%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
|||||||| || || ||||| || ||||| | ||| ||||| || || || ||
Sbjct 12807 TCATCTTCCTCCTTGTACTTCTCAGCATCAGCAAGCATGCGCTCAATCTCCTCCTTGGAC 12866
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| ||||| || || |||||| | ||| || || | | |||| || |
Sbjct 12867 AGGCGACCCTTGTCATTGGTGATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCAACG 12926
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
||| || |||| ||||| || ||||||| |||||| | || | ||| || || |
Sbjct 12927 GCAGAGACGTTCAGGATACCGTTGGCATCAAGATCGAAAGTGACCTCAATCTGAGGGACA 12986
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | |||||||| || | || || | || || | |||| ||| |
Sbjct 12987 CCACGAGGAGCAGGCGGAATACCAGTGAGCTCGAACTTGCCGAGGAGGTTGTTGTCCTTG 13046
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866
| || ||| || || ||| |||| | || | ||||| || || |||||
Sbjct 13047 GTGCGCTGACGCTCGCCCTCAAAGACCTGGATAAGGACACCG--GGCTGGTTATCGGAGA 13104
Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926
|| ||||||| | | ||||| | || || || || || | || || | ||
Sbjct 13105 AGGTGGAGAAGACCTCGGCCTTCTTGGTGGGGATAGTGGTGTTACGGGGGATGAGTTTGG 13164
Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986
|||| || ||||| ||| |||| || | || || | | || || ||| | ||
Sbjct 13165 TCATCATGCCACCAGCAGTCTCGATACCCATGGAGAGGGCAGCGACATC---GAGAAGCA 13221
Query 6987 GG-TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGA 7034
|| ||| | || || ||| |||| | | ||||| || ||||
Sbjct 13222 GGATCTCG------TTGGTGGACTTGGAAGAAGTGTCACCGGAGAGAATGGCAGCCTGGA 13275
Query 7035 CCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGT 7094
| | || || || ||||| |||||||||||||| || | || | || || ||||
Sbjct 13276 CGGCGGCACCATAGGCGACGGCCTCATCGGGGTTGATGGAGCGGTTGGGCTCCTTGCCGT 13335
Query 7095 TAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAA 7154
| || || || | | | | || | ||||| || || || |||||||| | |
Sbjct 13336 TGAAGTAGTCGGTAATGAGCTTCTGGACACGGGGGATACGGGTGGAACCACCGACGAGGA 13395
Query 7155 CGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTT 7214
|||| || | || | || |||||||| | || | || || ||||| |
Sbjct 13396 CGATCTCGTGAACCTGGCTCTTGTCGATCTTGGCATCACTGAGGACACGGTCCACAGGCT 13455
Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274
|| |||||| | ||| || || ||||| || || |||||||| || || |
Sbjct 13456 GGATGGTAGAACGGAAAAGATCCTGGCAAAGCTCCTCGAAGCGGGCACGGGTGATTGAGG 13515
Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334
| ||||| || | ||| ||| | | |||||||| |||||||| || || || | ||||
Sbjct 13516 TGTAGAAGTCGATGCCCTCGAAGAGAGAATCAATCTCAATGGTAGTCTGAGCGGAGGAAG 13575
Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394
| | || ||||| || ||||| || || || || | ||| ||||||||||| | |||
Sbjct 13576 ACAGGGTGCGCTTGGCACGCTCGCAAGCAGTGCGGAGACGGCGAAGGGCACGAGCGTTGG 13635
Query 7395 CGGAAATATC 7404
||||| |||
Sbjct 13636 TGGAAAGATC 13645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635086308279040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |