Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3618 156 5e-33 seq5020 89.7 6e-13 seq4016 84.2 3e-11 >seq3618 Length=19201 Score = 156 bits (172), Expect = 5e-33 Identities = 1124/1783 (63%), Gaps = 57/1783 (3%) Strand=Plus/Plus Query 105551 TCAAGACTGAACTGAATTGG-GCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGT 105609 |||| | |||||||||| || ||| || |||| | || || |||||||| || || Sbjct 722 TCAACAGTGAACTGAATCGGAGCG-GCAGCAGCCTGCGTGCGCAGGTAGTACATGCCAGT 780 Query 105610 CTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||||||| | ||||| | | |||||| | || |||| ||| | || Sbjct 781 CTTGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTGGTGATCTTGCCCATGCTGGGGTC 840 Query 105670 TTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCAT 105729 | |||| | || | ||| |||||| ||||| |||||| | ||||||||| Sbjct 841 CTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCGCCAT 900 Query 105730 ATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATC 105789 | | | | | ||| ||||| || || ||| || ||||| ||| || Sbjct 901 CTGCACAATTTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTC 960 Query 105790 TGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTCAT 105846 ||||| | | ||| || || || || || | | || ||| || | | ||||| Sbjct 961 AGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGA---TGCGGTTTTTCAT 1017 Query 105847 ATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAG--ATGCTTGTTGACAATC 105904 | | | ||||||||||||| | ||||| || | || ||| |||||||| | Sbjct 1018 AGCATCTGACCAAAGACCAAGTTCAACAAGATCCTTCAGCAGCCATGG--GTTGACAACC 1075 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 ||||| || || || | | | | |||||||||| || ||||| |||||||| Sbjct 1076 TGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATGTTCGAAGTATAGGGCTCAAAGCAC 1135 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 || || || || | || |||| || ||| || ||||| || || | || |||||| Sbjct 1136 TCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTG 1195 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTT 106083 || |||| || | |||||||| | |||||||| |||||||| | | ||| Sbjct 1196 TTGCGAATGCCATGCTCCTTGATTTGCTCCTTGAGGCTGTCCCAGTCCCACAGGTCGCTG 1255 Query 106084 GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAA 106143 || || || |||| ||||||| |||| || | |||| ||| | || ||||||| || Sbjct 1256 GGCTTGACGTTCC-ACATATCGTATTGCAGAATACCTTCGGAGGCAGGGGAACCCTTGAA 1314 Query 106144 TGTCTCATAGGAACCTTGGGCTTCAGCCAATTCA-CAGCTCGCCTCCAGGGATGCGTGAT 106202 | | || | || | | | || | ||| ||| | | | | | ||||| | Sbjct 1315 CGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGATGCAGTTAAAGCA-GCGTGGT 1373 Query 106203 ACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGC 106262 | || || |||||||| | || | ||| || ||| || || || | | | Sbjct 1374 AAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCAGGCGACTCGAAAGGCAATC 1433 Query 106263 GGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 106321 | || | || || | || ||||| ||||||||||| | ||| || || | ||| ||| Sbjct 1434 G-CAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGGCCGGTGACGC 1492 Query 106322 ATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTT 106378 || || || || || |||| || ||||| ||| || || | ||| Sbjct 1493 ATGTTGCTGTTACGTGC---CTCAGGGACAGGATAGTGGTTTACATCGATAATCTTGTTG 1549 Query 106379 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAG-TGCGAGT 106437 ||||| |||| | || | ||| || || || | | || || ||| | Sbjct 1550 AGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAGTCGAAGCATGC-ATC 1608 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 || | |||| | | | || || | || || | ||||||||||| ||| || Sbjct 1609 ATCGTAGTTGATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTC 1668 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | | | ||||| | || || || || | |||||| || || || || | || Sbjct 1669 AGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTT 1728 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||| ||||| ||||| |||||| || ||||||||||||||| | || | || ||||| Sbjct 1729 CTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAATGGATTACCAGTCTC 1788 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATG--GCGTTGGC 106674 ||||||| || || || | | ||| | | | | | || | ||| ||| | || Sbjct 1789 AGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTTTGAGCCTTG----ATGGTGCGCTTGC 1844 Query 106675 CCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCG 106732 || | |||||| ||||||||| ||| | || ||||| |||||| ||| || |||| Sbjct 1845 CCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTCA-CCATAGCAGTCG 1903 Query 106733 GAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGC 106792 | || || || || | ||||| | || | ||| | ||| | ||| || ||| Sbjct 1904 GCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATTTTTCTCGACACGC 1963 Query 106793 TTCATGAAAAGGTCTGGAATCC--ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTT 106850 |||||||| || || ||||||| | || || |||| ||||| | ||| |||| | Sbjct 1964 TTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAA--AGATCACGGGCACGAACCTCCT 2021 Query 106851 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 106910 | | || ||||| || | || |||||||| | || || | |||||| || |||| Sbjct 2022 CTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGAGTGCCAGGGTTCAA 2081 Query 106911 GATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTG 106964 | || | |||| | || ||||| ||| |||| | || ||||| || | Sbjct 2082 GGTAAATGGCGAAGGCACC---AGGACGCTTATTGCCACCTTGGTCAACGTAGCGGGCAG 2138 Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 107024 || ||| || || || ||||| || | || |||| || || || || || || Sbjct 2139 TGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTGCCGGCAA 2198 Query 107025 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 107084 | ||| | | || | | || | | | ||||| || |||||| || | Sbjct 2199 TGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTGAGGCCAATGCCACCAGCCATTTTGG 2258 Query 107085 AGAT--TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142 |||| | ||||| | | | | || || ||||||| || | || ||| || || | Sbjct 2259 AGATCATAGCGCA-AGT-CTTGAGCGTGTCATAGATGCCATCAATGCTGTCATCTTTCAT 2316 Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202 | ||| ||| |||||| || | ||| | | || ||||||||||||||||| || || Sbjct 2317 GTCGACAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAGCATTGAAGAGCGTGGG 2376 Query 107203 TGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260 || |||||| ||| | | |||| ||||| || ||| ||||| | || ||| Sbjct 2377 TGAGGCGTGAGTGA--AAAACTTGCTCGACATGAGGTTGTAGGTCTCAATAACGCGCTCA 2434 Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || | || || |||||||| || || ||||||| ||||| Sbjct 2435 ATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGT 2477 >seq5020 Length=23815 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| ||||||||||| || || ||||| || || ||||| || || Sbjct 18672 GGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTGAGACC 18613 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || |||||||| | ||| | || | ||| | ||| |||||| || Sbjct 18612 AGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAAAT 18553 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 |||||| ||| || || |||| ||||||| ||||||| ||| |||| ||| Sbjct 18552 ACCCTCAACAGCAGCGAAGGCAACGAGGCGCTGACCGAAGGA-TGAGTTCTTGTCAGCAA 18494 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479 ||| || | ||||| | |||||||| Sbjct 18493 TCCACTTGAGAGCCCAGTCGGCCTTCTT 18466 >seq4016 Length=25323 Score = 84.2 bits (92), Expect = 3e-11 Identities = 186/274 (68%), Gaps = 10/274 (4%) Strand=Plus/Minus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 ||||||||||| || ||||||| || || || || | |||| | |||||||| Sbjct 9915 GCATCAATCTCGTCGATGAAGATGATGCACGGGGCGTTCTTGCGGCCTTCGGCAAAGAGA 9856 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAAC 9489 ||||| || | | |||||||| || ||||||||||| || | | | || || Sbjct 9855 TCGCGCACACGGGATGGTCCCACACCGACGAACATCTCCACGAACTCAGATCCGCTGACG 9796 Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 | || |||||| || |||||||| ||| |||| ||||| || || ||||| | Sbjct 9795 CT--GAAGAAGGGAACGCCTGATTCACCGGCAGTGGCCTTTGCGAGCAGTGTTTTACCGG 9738 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA--CTTC-CAAAGT 9606 | || || || ||||| | ||||| ||||| || || |||||| |||| | || | Sbjct 9737 TGCCAGGTGGGCCAGCGAGAATAGCACCGCGTGGGATTTTTGCGCCAAGCTTCTCGAACT 9678 Query 9607 ATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 ||||||| ||||| | || | ||| | ||| Sbjct 9677 ---TCTCAGGCTGCTTCAAGAAGTTCACGAACTC 9647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589937613405440