Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq5617 102 2e-17 >seq5617 Length=361 Score = 102 bits (112), Expect = 2e-17 Identities = 231/340 (68%), Gaps = 8/340 (2%) Strand=Plus/Plus Query 26635 CGATCGAACGCCCGTTCGAGCTTCACGTCGTACAGGTT-CTCTGCGTAAGCCTCGCCGTT 26693 || ||| | || || | |||||| | |||||| ||||| | ||| ||| || |||||| Sbjct 23 CGCTCGTAGGCGCGCTGGAGCTTGATGTCGTATAGGTTTCGCTG-GTAGTCCGGGCCGTT 81 Query 26694 GTACAGCTCGGCGAACTTCGCCCACTTCCGGCCACGCAGCGCGGCGAGTAGCGCCTTGTC 26753 ||| ||| ||||| | | ||| || ||| | || ||| | || || ||| Sbjct 82 GTAGAGCGTCGCGAATTCGGACCATTTGCGGGCCTTCAACGCCTTATGCAGAACCGGGTC 141 Query 26754 GCCGAGGATGAAGCGCACGAACGCCTCGAGCTGCTCAGCTTCGCTGATCTTCATCGCGTC 26813 | ||||||| ||||||||||| ||| ||||| || |||| |||| | || Sbjct 142 GGTCTGGATGAAACGCACGAACGCGGCGAACTGCTGAGACTCGCCAGCGCTCATGTCCTC 201 Query 26814 GACGAACGCGAACACGTCCGGGTAGCCGA-GCGCGTTCCAGTGAAAGCCCATGATCTGGA 26872 |||||| | |||| | ||||| | |||| | ||||||||| ||||||||||||| Sbjct 202 GACGAATGTCTGCACGCTGGCATAGCCCAGGCGC-TGCCAGTGAAACCCCATGATCTGGA 260 Query 26873 ACGCGCCCCAGCTCGCGGCCTCGAGCGCGCACGCGGCAGAAATCTGCGACGCGCTTG--C 26930 | || |||||| |||| ||| |||||| | | | ||| |||||| || Sbjct 261 ATGCACCCCAGGAGGCGGACTCCAGCGCGGCGGTGTCGTCGATC--AAACGCGCATGACT 318 Query 26931 CAGGCGCGCATATTCCGCCGCGCCTCCGGCATAGCCGCCG 26970 ||||||| | || || | ||| ||||||||||||||| Sbjct 319 CAGGCGCTGGTGCTCAGCAGTGCCGCCGGCATAGCCGCCG 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119025322403456