Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq5617 93.3 1e-14 >seq5617 Length=361 Score = 93.3 bits (102), Expect = 1e-14 Identities = 163/238 (68%), Gaps = 12/238 (5%) Strand=Plus/Plus Query 23539 GAGCTTCGCGTCGTAGAGGTTGCGGGCATAGTCCGGGCCGTTGTAGCCCTTCGCGAACGC 23598 |||||| |||||| ||||| || |||||||||||||||||| | ||||||| | Sbjct 40 GAGCTTGATGTCGTATAGGTTTCGCTGGTAGTCCGGGCCGTTGTAGAGCGTCGCGAATTC 99 Query 23599 GGCCCACTTCCGGTTCTTTAGGGCGGACAGCAGCGACGAGTCGGCCGCGACGAAGCGCAC 23658 || ||| || ||| ||| | || |||| || ||||| | || ||| ||||| Sbjct 100 GGACCATTTGCGGGCCTTCAACGCCTTATGCAGAACCGGGTCGGTCTGGATGAAACGCAC 159 Query 23659 GAACCCGTCGAGCTG------GTCGCCTTCGCTCGTTTCCATCCGCGCGACGAACTCGTC 23712 |||| || ||| ||| ||||| ||||| | || | ||||||| | Sbjct 160 GAACGCGGCGAACTGCTGAGACTCGCCAGCGCTCATGTC------CTCGACGAATGTCTG 213 Query 23713 GATGCTCGCGTAGCCGAGGCGCTTCCAGTGGTAGCCCATCACCTGGAACGCGCCCCAG 23770 | ||| || ||||| ||||||| |||||| | ||||| | |||||| || |||||| Sbjct 214 CACGCTGGCATAGCCCAGGCGCTGCCAGTGAAACCCCATGATCTGGAATGCACCCCAG 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129645383833024