Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq4017 105 2e-18 >seq4017 Length=362 Score = 105 bits (116), Expect = 2e-18 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 38369 CGCCTGCTCTTCGCTGATGTCCTGCAGGCGCTCGACGCGAACAGCGGTGATCTCCAGCAG 38428 |||||| || | ||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 233 CGCCTGGTCGCCACTGATGTCCTGCAACCGCTCGACGCGGACGGCGGTGATCTCCAGCAG 174 Query 38429 GATGCGGGAGGCCCAGCGGGGCATGTGGATACTTGG 38464 |||||| ||||||| | || |||||||| ||||| Sbjct 173 GATGCGACTGGCCCAGTGCGGTATGTGGATGCTTGG 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172743186603392