Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq2362 102 3e-17 >seq2362 Length=394 Score = 102 bits (112), Expect = 3e-17 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 26067 CAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGT 26126 |||||| ||||| ||||||||||| || ||||| |||| | ||||| |||||||| || Sbjct 384 CAGGTATTCGCCGGCGATCTCCGCCACTTTGCCGAACATCGACACGCGGTGCCATTCGGT 325 Query 26127 CACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAAT 26186 | || ||| | |||||||||||| ||| |||| ||| |||||| | | | Sbjct 324 CTTCTCGACCTTCTGGCCGGTCTGCTTGTCGGTCCACTGTTCACTGGTCGCCAGACTCAG 265 Query 26187 GTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGT-TCCCCAGGTTAC 26245 ||||| || ||| ||| ||||||| ||| || | ||| ||||| | || || | | | Sbjct 264 GTTGGTCACGGCGTTGCCGTTAGGCAGGTAGCGAACCTCGGGATCCTGGCCGCACG-TGC 206 Query 26246 CGACAAGGATTACTTTATTTACGCCGCG 26273 |||| | || ||||| || || || || Sbjct 205 CGACCAATATGACTTTGTTAACCCCACG 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159806486284096