Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq5299 96.9 1e-15 >seq5299 Length=367 Score = 96.9 bits (106), Expect = 1e-15 Identities = 157/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 48538 CGAAGTCAGTGAGTGGGTA--AGCCGCCAAATCCTCAGCGATACCGGCAGCATCCATAAC 48595 ||||||| | |||||| | ||||| | |||||| ||| ||||| |||||||| ||| Sbjct 141 CGAAGTCTGGGAGTGGCTCCTAGCCG--AGATCCTCGCCGAAACCGGTAGCATCCACAAC 198 Query 48596 CCTGACCACGAACACCTGTTAGAGGCTGACCTCTGCTTCATGTGGGCGTCCGATTCGTTC 48655 || || | || ||| | || || || | | | ||||||||||| | | ||| Sbjct 199 GAAGAGCATGCCCATCTGATCGATGCGAACATTCGTGTGATGTGGGCGTCTGCCGCCTTC 258 Query 48656 GCTAAGAAAGGGCGGTATGTCCTCGGCCAAGCCGAGCAGGTAATGCTCCGCGCCGGTGGT 48715 | ||||| || || || | ||||| ||||||||| || |||| || || ||| Sbjct 259 ACGAAGAAGGGTAGGACGGTGGTGGGCCAGGCCGAGCAGCTAGCATTCCGAGCTGGCGGT 318 Query 48716 TGGCAGAAAGCCAGAATGGAACAGCAGATGTATGAATGGTTCGG 48759 |||| ||| ||| | ||||| || |||||| ||| |||||||| Sbjct 319 TGGCTGAAGGCCCGGATGGAGCAACAGATGCGTGATTGGTTCGG 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157038678770816