Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3618 300 3e-76 seq5020 194 3e-44 >seq3618 Length=19201 Score = 300 bits (332), Expect = 3e-76 Identities = 1212/1876 (65%), Gaps = 76/1876 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| | |||||||||| ||||| || ||||||||||| ||||| Sbjct 725 ACAGTGAACTGAATCGGAGCGGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCAGTCTTG 784 Query 212613 AGGCC---CTTGCCCCAGCC-GTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATAT 212667 || || ||| ||| || ||| | ||||| |||| ||| |||| | || Sbjct 785 AGTCCAAGCTT---CCATCCTGTGAAA-TGCAT-GCTGGTGA---TCTTGCCC-----AT 831 Query 212668 TCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGG 212727 |||| | || || || | ||| || |||||| |||||| ||||| | Sbjct 832 GCTGGGGTCCTTCATG-------TGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCAC 884 Query 212728 CCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGA 212787 | | ||| || ||||| | | || | | ||| |||| |||||| || |||||| | | Sbjct 885 CACGGTCTGCCGCCATCTGCACAATTTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACA 944 Query 212788 TTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA 212847 | |||| || || |||| | |||||||||||| | || || || | | | || Sbjct 945 GGGCCTTGACATCGTCAGGGATGTTGGGGATGTTCTGGATGGAGCC---GT-TCTCGGCA 1000 Query 212848 --GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCAC-TTGACCAG 212902 | ||| | ||| | || ||| || || | || || | | || | ||| Sbjct 1001 ATGATGCGGTTTTTCATAGCATCTGACCAAAGACCAA-GTTCAACAAGATCCTTCAGCAG 1059 Query 212903 GTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGT 212962 |||||||| | |||||| || || | ||||| | | |||||| | ||| ||||| Sbjct 1060 CCATGGGTTGACAACCTGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATGTTCGAAGT 1119 Query 212963 GTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGG 213022 |||||||| | || ||||||||| || |||||||||| || ||||| ||||||||||| Sbjct 1120 ATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGG 1179 Query 213023 AGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCC 213080 || | ||| |||||||| | | || ||||| ||| || || || ||| | || Sbjct 1180 GGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGAT-TTGCTCCTTGAGGCTGT-CC 1237 Query 213081 CAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG 213140 ||||||| ||||||| | ||| ||||||||||| || | |||| || Sbjct 1238 CAGTCCC---------ACAGGTCGCTGGGCTTGACGTTCCACATATCGTATTGCAGAATA 1288 Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 |||| | | ||| |||| | | || ||||| ||||| | ||||||| | ||| Sbjct 1289 CCTTCGGAGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCAACCTTGGCGATCTCA 1348 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 || || | ||||||| ||| || || ||||| |||| | ||||||||| Sbjct 1349 ACAGATGCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGA 1408 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACC 213320 ||||| || ||| ||| |||| || |||| | ||||| || || || || Sbjct 1409 GCCTCAGGCGACTCGAAAGGCAATCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACA 1468 Query 213321 CCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTT-GGAGCACTCCTCCAAGGGGTAAAA 213379 |||| |||||||| | ||| | || ||| || | || ||| | || || Sbjct 1469 CCGACACCGATGGGCCGGTGACGCATGTTGCTGTTACGTGC-CTCAGGGACAGGATAGTG 1527 Query 213380 GTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA 213439 ||| ||||| ||||||||||| ||||| | |||| ||| || | | ||| | Sbjct 1528 GTTTACATCGATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTT 1587 Query 213440 CTCGTGATTGAA-CACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCA 213498 || | | ||| || | | | ||| | | ||| ||| ||| || | || | Sbjct 1588 CTTGAAGTCGAAGCATGCA-TCATCGTAGTTGATAAAGGCAGACAGAGCCAGAGAAGCAA 1646 Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558 |||||||||| || ||||| | || | | ||||| |||||||| ||||| |||||| Sbjct 1647 GGTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGG 1706 Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGA 213618 || ||||| || || ||||||| ||||| ||| |||| || |||||||||| Sbjct 1707 AGCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGA 1766 Query 213619 GCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGG 213678 ||||| | || || ||||| ||| | | | || ||| | ||| || | | Sbjct 1767 GCATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTTTGAG 1826 Query 213679 CCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGA 213738 |||||| ||| || | || | | |||||||| ||||| | | | | Sbjct 1827 CCTTGATGGTGCGCTTGCCCTTGCCCTCCCT---CTCGTACTTCTCGTACAATGCCTCAA 1883 Query 213739 ATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGT 213798 |||| | || || | | || || || || ||||||||||| |||| | Sbjct 1884 ATTCCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACT 1943 Query 213799 C-CCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGG 213857 | || | |||| ||| | || |||||| || ||||| | ||| || ||| ||| || Sbjct 1944 CGCCATTTTTCTC-GACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGA 2002 Query 213858 TCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATG 213917 || | || | ||| || ||| ||| || || ||||| || || ||||||| | Sbjct 2003 TCACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACG 2062 Query 213918 TCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGG 213974 || | |||||| || || | ||| ||||| ||||| || | || | ||||| || ||| Sbjct 2063 TCTGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTGCCACCTTGG 2122 Query 213975 TCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT 214034 || || | ||| ||||||||| || || | || || || || ||||| Sbjct 2123 TCAACGTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTG 2182 Query 214035 CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTA 214092 |||||||| || || || || ||||| | |||| | | || ||| ||| || | Sbjct 2183 CCGTTGGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACAT--TGAGGCCAA 2240 Query 214093 TGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCA 214152 ||||||| || ||||||||||| ||||| | | | || || |||||| | | Sbjct 2241 TGCCACCAGCCATTTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAA 2300 Query 214153 TGCTGTCATCTGTGAGGTTCAGCAAG-AAGCAGCTCGAGAGCTGGGGCCTGGACGAG--C 214209 ||||||||||| | | | || |||| ||||| ||| ||||| | || || | | | Sbjct 2301 TGCTGTCATCTTTCATG-TCGACAAGAAAGCAAGACGATAGCTGAG--CTTGAGGGGTAC 2357 Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269 ||| ||||| |||||||| ||| || | | ||||||| | || | ||| |||||| Sbjct 2358 CAGCATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGG 2417 Query 214270 TCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGT 214329 |||| | || || | || ||| | |||| | ||| | ||||| Sbjct 2418 TCTCAATAACGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGT 2477 Query 214330 GCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAG 214386 |||| || | || | || || ||| | |||||||||||| || |||||||| | Sbjct 2478 GCTGTGGACGCTCAACAATCTTGCCGTTGAG---CTTGAGCAGGTATGATCGCTCCAGGG 2534 Query 214387 TCTTGAACCCAAAGTA 214402 ||||||| |||||||| Sbjct 2535 TCTTGAAGCCAAAGTA 2550 >seq5020 Length=23815 Score = 194 bits (214), Expect = 3e-44 Identities = 352/506 (70%), Gaps = 13/506 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 18963 CTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTAGTCTTGCCACCCAGGGAGATGTTCTC 18904 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957 ||||||| ||| ||||||| | ||| |||||| | || ||| | | || | Sbjct 18903 CATGAAGTCGAAAGGGTTGGTGGAGTTGTACACCT-TCTCGTTGCCAAGAGCGACGAGGA 18845 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||| ||||| | |||||||||| ||||||||| | ||||| Sbjct 18844 GGCGGTCAGCGACGAACTCAATGTACTGCTGCATGAGGGTGGCGTTCATGCCGAGGAGGG 18785 Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| || || ||| | ||||| |||||||| || |||||| || | ||| Sbjct 18784 -CACAGGGAAGAGCGTCAGTGAGGAACTCCTTTTCGTAAACCACGGCCTCAGTGATAATA 18726 Query 48077 TGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || || | || ||| || | || || |||||| || | || | ||| Sbjct 18725 TCCTCAATGACCTGCTTGCTGGGGCGGTTCTT---CAGGTG---GGAGTGAAGGAGACAG 18672 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||| | || || || || ||| ||| |||||||||| ||||||| Sbjct 18671 GCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTGAGACCA 18612 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || ||||||||||| || | ||||||| || |||||| || Sbjct 18611 GGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAAATA 18552 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||| || ||| | || ||||| || | ||||||||| | ||| Sbjct 18551 CCCTCAACAGCAGCGAAGGCAACGAGGCGCTGACCGAAGGATGAGTTCTTGTCAGCAATC 18492 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTT 48339 || || |||||||| |||||||| Sbjct 18491 CACTTGAGAGCCCAGTCGGCCTTCTT 18466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931464611799040