Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3618 235 1e-56 seq5020 113 8e-20 >seq3618 Length=19201 Score = 235 bits (260), Expect = 1e-56 Identities = 823/1267 (65%), Gaps = 37/1267 (3%) Strand=Plus/Plus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGT 221481 ||||||||||| || |||||||||||| ||||||||| ||| | ||||| || || Sbjct 1364 GCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAG-CTCACGAGCCTCAGGCGACTC 1422 Query 221482 GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541 ||| |||| ||||| | ||| |||| || || || || || |||| ||||||||| Sbjct 1423 GAAAGGCAATCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGG 1482 Query 221542 CCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATC 221599 || ||| | | ||||| | || || || || || ||||| ||| || ||||| Sbjct 1483 CCGGTGACGCATGTTGCTGTTACG--TGCCTCAGGGACAGGATAGTGGTTTACATCGATA 1540 Query 221600 AGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAAC 221659 | |||||||| || || | |||| || ||| ||||||| ||||| Sbjct 1541 ATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTC------TTGAAG 1594 Query 221660 ACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGG 221719 | || | | |||| | | | ||| || || || | || ||| Sbjct 1595 TCGAAGCATGCATCATCGTAG------TTGATAAAGGCAGACAGAGCCAGAGAAGCAAGG 1648 Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 || || || || |||||||| | ||||| |||||||| || || |||||| | Sbjct 1649 TTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAG 1708 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839 | ||| || || |||| || || || ||| || ||| |||||||||||||||| Sbjct 1709 CTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGC 1768 Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCG 221899 || || ||| |||||||| ||| ||| | || ||| || ||| || | | || Sbjct 1769 ATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTTTGAGCC 1828 Query 221900 CTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAAC 221959 | | || | |||| | ||||| ||| | | | | ||| | || ||||| Sbjct 1829 TTGATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTC-GTACAATGC--CTCAAAT 1885 Query 221960 TTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT-G 222018 | ||||| || ||| | ||||| || ||| |||||||| || |||| | | Sbjct 1886 TCCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCG 1945 Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078 | || || | ||| | || ||||||||| ||||| ||||| || || | || ||||| Sbjct 1946 CCATTTTTC-TCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATC 2004 Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138 | || || |||||| ||| | ||| || | ||||| | |||||||| | ||| Sbjct 2005 ACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTC 2064 Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATC 222198 | |||||| || || || || | ||| | || || || ||||| |||||||| || | Sbjct 2065 TGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTGCCACCTTGGT- 2123 Query 222199 CACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGAC 222257 || | | ||| | |||||||| || || | || || || || ||||| | Sbjct 2124 CAACGTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGC 2183 Query 222258 CGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACTGGCAGACATGCCGA 222314 |||||||||| |||||| | || |||| | ||| | || | ||| | Sbjct 2184 CGTTGGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGA---ACATTGAGGCCAA 2240 Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374 | ||||| || ||| |||||||| ||||| ||||||| ||||| |||||| || | Sbjct 2241 TGCCACCAGCCATTTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAA 2300 Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGG 222434 | ||| || || | || | ||||| |||||||| | ||||| || | || || | Sbjct 2301 TGCTGTCATCTTTCATGTCGACAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAG 2360 Query 222435 CGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCT 222494 | || || |||||||| |||||| || || | || ||||| || | ||| |||| Sbjct 2361 CATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCT 2420 Query 222495 CTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCATGTACATGTAC 222553 | | || | | || ||||| ||| || | | | ||| | ||| ||||| | Sbjct 2421 CAATAACGCGCTCAATATTGTCACCCCAGATGCCG-ACAGCGACGCGCATAATCATGTGC 2479 Query 222554 TGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCT 222611 || || | ||| ||| || | ||||| ||||||||| ||| ||||| |||| Sbjct 2480 TGTGGACGCTCAACAATCTTGCCGTTGAGCT--TGAGCAGGTATGATCGCTCCAGGGTCT 2537 Query 222612 TGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCG 222671 |||| |||||||| | | || || || | | ||| || | |||| |||||||||| Sbjct 2538 TGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTACACGATCGCGGAGTCCAGCTCCT 2597 Query 222672 ACTTGTG 222678 |||||| Sbjct 2598 CCTTGTG 2604 Score = 100 bits (110), Expect = 5e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||||| | | |||||| | ||| ||||| | || Sbjct 1066 GTTGACAACCTGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATGTTCGAAGTATAGGG 1125 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 || | || |||||||||||| || ||||| | || ||||| ||||||||||| || | Sbjct 1126 CTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAG 1185 Query 221236 CAGCAGACTGTTGCG 221250 ||||||||||||||| Sbjct 1186 CAGCAGACTGTTGCG 1200 >seq5020 Length=23815 Score = 113 bits (124), Expect = 8e-20 Identities = 293/450 (65%), Gaps = 13/450 (3%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| |||||||| ||||| || || ||||||||| | || || ||| Sbjct 18521 AGCGCCTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCA 18580 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995 |||||||||||||| || || |||||| || || ||||| ||||||||||| ||| Sbjct 18581 TCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT-CACTTTCTCCAACGAGCTTATC 18639 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | || |||||||| |||| || |||||||| || || || | |||| || Sbjct 18640 TCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGTCTCCTTCACTC---CCACCTG--- 18693 Query 26056 CACAAACCTTC---TCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGA 26111 | |||| | |||| || | | | ||| |||| ||||| |||| ||| Sbjct 18694 -AAGAACCGCCCCAGCAAGCAGGTCATTGAGGATATTATCACTGAGGCCGTGGTTTACGA 18752 Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171 |||||||| | | ||||||||| || ||||| Sbjct 18753 AAAGGAGTTCCTCACTGACGCTCTTCCCTGTGCCCTCCTCGGCATGAACGCCACCCTCAT 18812 Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231 | || |||||||||| || || |||| || || | || || || | | Sbjct 18813 GCAGCAGTACATTGAGTTCGTCGCTGACCGCCTCCTCGTCGCTCTTGGCAACGAGAAGGT 18872 Query 26232 CTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291 |||| | | ||||| |||||||| ||||| ||||| || ||| || ||||| || Sbjct 18873 GTACAACTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACTAA 18932 Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||| || ||| | |||| |||||| || Sbjct 18933 CTTCTTCGAGAAGCGTGTCGCCGACTACCA 18962 Score = 93.3 bits (102), Expect = 8e-14 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| ||||| || || ||||| Sbjct 18066 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAAATCGATCTC 18125 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 |||| || | ||| |||| || || || | | |||||| || | || || Sbjct 18126 TCCAAAGATCTTCACGACTGGAACAACCGC-CTGAACGATGACGAGAAGTACTTCATCTC 18184 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | ||||| ||||| || |||||||| || || || |||||||| ||| ||| | Sbjct 18185 TCACATCTTGGCTTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTGGTTGAGCG 18244 Query 25653 ATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | |||||||| || | || |||| || ||||||||||||||||| Sbjct 18245 CTTCAGCGCCGAAGTGCAAGTCCCTG-AGGCTCGCTGCTTCTACGGTTTCCAGAT 18298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928776808560640