Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq2362 114 3e-21 >seq2362 Length=394 Score = 114 bits (126), Expect = 3e-21 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 25871 CCTTTGCGTGTGTACTCGCCGGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGC 25930 || ||||| ||| |||||||| | ||| |||| || ||| | | | || |||||| Sbjct 392 CCCTTGCGCAGGTATTCGCCGGCGATCTCCGCCACTTTGCCGAACATCGACACGCGGTGC 333 Query 25931 CACTCTGTTTTTTCTACCGGCTGCCCTGTCTGCTTGTCTTTGTACTGCTCACTGGTGGCA 25990 || || || || || ||| ||| || ||||||||||| | |||| |||||||| || Sbjct 332 CATTCGGTCTTCTCGACCTTCTGGCCGGTCTGCTTGTCGGTCCACTGTTCACTGGTCGCC 273 Query 25991 ATGCTTAAATTTGCCACGGCGGTACCGTTAGGCATATACCTAACTTCCGGGTCCTGGCCT 26050 | || | || | ||||||| | |||||||||| || | ||| || || |||||||| Sbjct 272 AGACTCAGGTTGGTCACGGCGTTGCCGTTAGGCAGGTAGCGAACCTCGGGATCCTGGCCG 213 Query 26051 AAGTTGCCGACAATGATTACCTTGTTAATTCCGCGTGCCAT 26091 | ||||||| | || || ||||||| || || ||||| Sbjct 212 CACGTGCCGACCAATATGACTTTGTTAACCCCACGGGCCAT 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123652200627968