Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_021305.1 Length=76179 Score E Sequences producing significant alignments: (Bits) Value seq3110 136 2e-27 >seq3110 Length=303 Score = 136 bits (150), Expect = 2e-27 Identities = 196/276 (71%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 66082 TCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCA 66141 ||||||| || ||||| | || ||||| | ||| || |||||||| ||||| |||||| Sbjct 31 TCGAAGGTGAAATCGGCGTCATGCACGTGGTCCTCCAGGCGCGCCTGATGTCCCAGGCCC 90 Query 66142 TGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGT 66201 |||||||| |||| || | ||| | | ||||| ||| | ||| |||||||| Sbjct 91 TGCGCAAGATCACCGGTAACATTAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGA 150 Query 66202 TGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGG 66261 | || |||||||||| || | | ||||| | |||||||| || || || | Sbjct 151 TCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGTAA---ACCACCACCGGTGGTAACG 207 Query 66262 CTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAG 66321 | ||| |||||||||||| || ||| |||| |||| || | || | | |||||||| Sbjct 208 CGCTGAAGTTCTACGCCTCGGTTCGCCTGGACATCCGCCGTACCGGTGCGGGGAAGGAAG 267 Query 66322 GCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGG 66357 ||||||| | ||||||| | ||||| || |||| Sbjct 268 GCGATGAAGTGGTCGGCAGCGAAACCCGCGTCAAGG 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243630610842240