Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_021309.1 Length=74711 Score E Sequences producing significant alignments: (Bits) Value seq3110 132 2e-26 >seq3110 Length=303 Score = 132 bits (146), Expect = 2e-26 Identities = 194/274 (71%), Gaps = 3/274 (1%) Strand=Plus/Plus Query 65102 TCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCA 65161 ||||||| || ||||| | || ||||| | ||| || |||||||| ||||| |||||| Sbjct 31 TCGAAGGTGAAATCGGCGTCATGCACGTGGTCCTCCAGGCGCGCCTGATGTCCCAGGCCC 90 Query 65162 TGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGT 65221 |||||||| |||| || | ||| | | ||||| ||| | ||| |||||||| Sbjct 91 TGCGCAAGATCACCGGTAACATTAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGA 150 Query 65222 TGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGG 65281 | || |||||||||| || | | ||||| | |||||||| || || || | Sbjct 151 TCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGTAA---ACCACCACCGGTGGTAACG 207 Query 65282 CTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAG 65341 | ||| |||||||||||| || ||| |||| |||| || | || | | |||||||| Sbjct 208 CGCTGAAGTTCTACGCCTCGGTTCGCCTGGACATCCGCCGTACCGGTGCGGGGAAGGAAG 267 Query 65342 GCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 65375 ||||||| | ||||||| | ||||| || || Sbjct 268 GCGATGAAGTGGTCGGCAGCGAAACCCGCGTCAA 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238933346109952