Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq2362 87.8 5e-13 >seq2362 Length=394 Score = 87.8 bits (96), Expect = 5e-13 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 33184 AACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATATGCCTTCT 33243 |||||||| || | | ||||| ||| || || || || ||| || ||||| Sbjct 187 AACAAAGTCATATTGGTCGGCACGTGCGGCCAGGATCCCGAGGTTCGCTACCTGCCTAAC 246 Query 33244 GGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATAAAGCA-AC 33302 ||| ||| ||| ||| ||| |||||| || || ||||||| ||| || ||| || Sbjct 247 GGCAACGCCGTGACCAACCTGAGTCTGGCGACCAGTGAACAGTGGACCGACAA-GCAGAC 305 Query 33303 AGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGCTGGCAGA 33362 || | ||| ||| |||| |||||||| |||||| || ||||| || |||| || Sbjct 306 CGGCCAGAAGGTCGAGAAGACCGAATGGCACCGCGTGTCGATGTTCGGCAAAGTGGCGGA 365 Query 33363 GGTGGCTGGCGAATACCTGCGCAAAGG 33389 | | || ||||||||||||||||| || Sbjct 366 GATCGCCGGCGAATACCTGCGCAAGGG 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152034226804608