Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= NC_021534.1
Length=47552
Score E
Sequences producing significant alignments: (Bits) Value
seq2362 87.8 5e-13
>seq2362
Length=394
Score = 87.8 bits (96), Expect = 5e-13
Identities = 145/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 33184 AACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATATGCCTTCT 33243
|||||||| || | | ||||| ||| || || || || ||| || |||||
Sbjct 187 AACAAAGTCATATTGGTCGGCACGTGCGGCCAGGATCCCGAGGTTCGCTACCTGCCTAAC 246
Query 33244 GGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATAAAGCA-AC 33302
||| ||| ||| ||| ||| |||||| || || ||||||| ||| || ||| ||
Sbjct 247 GGCAACGCCGTGACCAACCTGAGTCTGGCGACCAGTGAACAGTGGACCGACAA-GCAGAC 305
Query 33303 AGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGCTGGCAGA 33362
|| | ||| ||| |||| |||||||| |||||| || ||||| || |||| ||
Sbjct 306 CGGCCAGAAGGTCGAGAAGACCGAATGGCACCGCGTGTCGATGTTCGGCAAAGTGGCGGA 365
Query 33363 GGTGGCTGGCGAATACCTGCGCAAAGG 33389
| | || ||||||||||||||||| ||
Sbjct 366 GATCGCCGGCGAATACCTGCGCAAGGG 392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152034226804608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |