Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3618 156 4e-33 seq3611 109 5e-19 seq629 91.5 1e-13 >seq3618 Length=19201 Score = 156 bits (172), Expect = 4e-33 Identities = 1072/1686 (64%), Gaps = 80/1686 (5%) Strand=Plus/Plus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATAT-GTCGCGGTATTGTTGCAATATTTTG 138416 |||||||| || |||||||| || | | || ||| || || | | || || || Sbjct 923 ATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTCAGGG-ATGTTGGGGATGTTCTG 981 Query 138417 AATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT 138476 ||| ||||| | ||||||||||| ||| |||| |||| | ||| ||| || Sbjct 982 GATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGAC-CAAGTT 1040 Query 138477 GATCAAG-TCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535 | |||| || || | ||| || ||| | ||||| || || || || | || || | Sbjct 1041 CAACAAGATCCTTCAGCAGCCATGGGTTGACAACCTGGAACTCGCCAGCAAGCACACGGC 1100 Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595 | ||| ||||| || | |||||||| | |||||||| || |||||||| | | Sbjct 1101 GCTGGTAGATGTTCGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATG 1160 Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655 | | || || |||||| || | || ||| || || | || || ||||||| Sbjct 1161 TACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGATTT 1220 Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 | |||||||| ||||||||||| ||||| || || ||||||||||||||| | Sbjct 1221 GCTCCTTGAGGCTGTCCCAGTCCCACAGGTCGCTGGGCTTGACGTTCCACATATCGTATT 1280 Query 138716 GTA----ACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCA--AACT 138769 | | || ||| | | | || || |||| | |||| |||| || ||| Sbjct 1281 GCAGAATACCTTCGGAGGCAGG-GGAAC--CCTT-GAACGACGAGTATGGGCCCTCAAC- 1335 Query 138770 CTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCT 138829 |||| || | ||| || | ||| | | ||||||||| || ||||||| Sbjct 1336 CTTG-GCGATCTCAACAGATGCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCT 1394 Query 138830 GATTGAGCAATCGGGCCTC-GGCGCTCTCGTACGGCATGCG--GAGCATCGTGAACGCGT 138886 |||||| || ||||| |||| |||| | |||| || ||||| | || |||| Sbjct 1395 TGTTGAGCTCACGAGCCTCAGGCGA-CTCGAAAGGCAATCGCAGAGCAAGG--AAGGCGT 1451 Query 138887 CGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG- 138945 | || || ||||| || || || |||| || || || |||| || ||| || || Sbjct 1452 CAGCGAGGCCTTGAACACCGACACCGATGGGCCGGTGACGCATGTT----GCTGTTACGT 1507 Query 138946 GCTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACC 139002 || || || |||||| | |||||||||||| || ||||| | ||| || || || || Sbjct 1508 GCCTCAGGGACAGGATAGTGGTTTACATCGATAATCTTGTTGAGATTGCGAACCACAAC- 1566 Query 139003 TTAGTCGTATGCTTTAATCGTTCAAAATCGT-ATGTGCCCCCGTTGTCGTCGACGACGTC 139061 || | ||| ||| ||| || || | | || | | | || || || Sbjct 1567 TTGG--GTAA-CTT----CGTGCAGCTTCTTGAAGTCGAAGCATG--CATCATCGTAGTT 1617 Query 139062 GACAAATTTGTTGACACAAATCGAG--GCTATGTTGCACACCGCCACTTCGTCGGGGTCG 139119 || ||| | |||| | ||| || | |||||| || || || ||||| || | Sbjct 1618 GATAAAG--GCAGACAGAGCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCA 1675 Query 139120 CTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGA 139179 || |||| || || | || | || | ||| ||||| | || | || Sbjct 1676 GAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGG 1735 Query 139180 TTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGT 139239 ||||| || ||||| ||||| || ||||| ||||| | || | ||||| || ||| Sbjct 1736 TTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGT 1795 Query 139240 GTCTCTATAATGAATTTGAACAAGTCCCT--AGCTTGTATTTGACGCACGTAAAGTT--C 139295 | ||| | || | | | ||| | | ||| | || | || | | || | Sbjct 1796 GCCTCAAGGATCGAGT--ACCAAAGCTTTTGAGCCTTGAT--GGTGCGCTTGCCCTTGCC 1851 Query 139296 GTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATC 139355 || | ||||||||| ||||| | | | || ||| ||||| ||| ||| | ||| | Sbjct 1852 CTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTCACCATAGCAGTCGGCAAGGCC 1911 Query 139356 GCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAA 139415 | |||| | |||||||||||| | ||| |||| || || ||| ||| ||||||| Sbjct 1912 AGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATTTTTCTCGACACGCTTCATGAA 1971 Query 139416 CAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTC-CGAACCCA 139474 |||||||||||||| | ||||| | | ||| || || | | || | | ||| Sbjct 1972 GAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACGGGCA--CGAACCTCCTCTTTGCCA 2029 Query 139475 TGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGAT 139532 || | | || | | | ||||| ||||| ||||| | |||||| ||||| || || || Sbjct 2030 TGGTTC-TTACGGAGATCGAGGAACTCAAAGACGTCTGAGTGCCAGGGTTCAAGGTAAAT 2088 Query 139533 GGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAA 139589 ||| | || || || || ||||||||| || |||| || ||| || ||||| Sbjct 2089 GGCGAAGGCACCAGGACGCTTATTGCCACCTTGGTCAACGTAGCGGGCAGTGTTGTTGAA 2148 Query 139590 TACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCT----ACGGATGGGAC 139645 || || | ||| ||| | || || | | || |||||||||| | | | | | | Sbjct 2149 GACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAGCC 2208 Query 139646 TGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATAT 139703 || || || |||| || ||||||| ||| || || || | | |||||| || Sbjct 2209 AGTAGCCCGAATTCGG------TGAACATTGAGGCCAATGCCACCAGCCATTTTGGAGAT 2262 Query 139704 TAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGA 139762 | | ||||| || | | || || || || || |||||||| || | ||| || Sbjct 2263 CATAGCGCAAGTCTTG-AGCGTGTCATAGATGCCATCAATGCTGTCATCTTTCATGTCGA 2321 Query 139763 CCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCG 139822 | |||||||| ||||| || || | | | || || || || || || || | Sbjct 2322 CAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAGCATTGAAGAGCGTGGGTGAGG 2381 Query 139823 CGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCC 139882 |||| ||||| | | ||||||| | | ||| || || || ||| | |||||| Sbjct 2382 CGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTCAATAACGCGCTCAATATTGT 2441 Query 139883 TTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGC 139942 || ||| ||||||| ||| ||||| | ||| || || || || | | | || Sbjct 2442 CACCCCAGATGCCGACAGCGACGCGCATAATCATGTGCTGTGGACGCTCAACAATCTTGC 2501 Query 139943 CCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTT 140000 | | || || ||| || | || ||| ||||||||| |||||||||| ||||| Sbjct 2502 CGTTGAGCTTGAGCAGGTATGATCG--CTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTT 2559 Query 140001 GAAATC 140006 |||||| Sbjct 2560 GAAATC 2565 >seq3611 Length=65567 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| ||||| || || || || || || || || ||| | Sbjct 3281 ATGCAGATCTTTGTCAAGACGCTCACCGGCAAGACCATCACCCTGGAGGTCGAGTCCAGC 3222 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || |||||| Sbjct 3221 GACACCATTGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAA 3162 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||| |||||||| | | || || |||||| Sbjct 3161 CAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTATAAC 3102 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || ||||||||| | || | || || ||| Sbjct 3101 ATCCAGAAGGAGAGTACTCTCCACTTGGTGCTCCGTCTTCGTGGTGGC 3054 >seq629 Length=20836 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || ||||| ||||| || || || || || | | Sbjct 19248 GATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTC 19307 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 19308 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 19367 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||| || || || ||||| |||||| | | | || || || || Sbjct 19368 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAA 19427 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || ||||| || || || ||| Sbjct 19428 CATCCAGAAGGAGTCTACCCTCCAC 19452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449864667495680