Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= NC_022059.1
Length=77367
Score E
Sequences producing significant alignments: (Bits) Value
seq3110 122 4e-23
>seq3110
Length=303
Score = 122 bits (134), Expect = 4e-23
Identities = 193/276 (70%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 67914 TCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCA 67973
||||||| || ||||| | | |||||| | ||| || || ||||||||||| ||||||
Sbjct 31 TCGAAGGTGAAATCGGCGTCATGCACGTGGTCCTCCAGGCGCGCCTGATGTCCCAGGCCC 90
Query 67974 TGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGC 68033
|||||||| | ||||| | ||| | | ||||| || | | | || |||
Sbjct 91 TGCGCAAGATCACCGGTAACATTAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGA 150
Query 68034 TGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGG 68093
| || |||||||||| || | | ||||| | ||||||||||||||||| |
Sbjct 151 TCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGTAA---ACCACCACCGGTGGTAACG 207
Query 68094 CTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAG 68153
| ||| |||||||||||||| || |||| ||||| | | || | | ||||||||
Sbjct 208 CGCTGAAGTTCTACGCCTCGGTTCGCCTGGACATCCGCCGTACCGGTGCGGGGAAGGAAG 267
Query 68154 GCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGG 68189
||||||| | ||||||| | || ||||| ||||
Sbjct 268 GCGATGAAGTGGTCGGCAGCGAAACCCGCGTCAAGG 303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 247431939522048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |