Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq2362 120 8e-23 >seq2362 Length=394 Score = 120 bits (132), Expect = 8e-23 Identities = 133/176 (76%), Gaps = 6/176 (3%) Strand=Plus/Minus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 ||||||||||| || |||||||| ||||| || || |||||||| | | ||||||||| Sbjct 392 CCCTTGCGCAGGTATTCGCCGGCGATCTCCGCCACTTTGCCGAACATCGACACGCGGTGC 333 Query 23599 CATTCGGTCTTTTC---CTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTG 23655 ||||||||||| || ||| || ||||||||||||||| |||| ||| || Sbjct 332 CATTCGGTCTTCTCGACCTT---CTGGCCGGTCTGCTTGTCGGTCCACTGTTCACTGGTC 276 Query 23656 GCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTC 23711 ||||| || | |||| ||||| | |||||| |||||||||| || || || || Sbjct 275 GCCAGACTCAGGTTGGTCACGGCGTTGCCGTTAGGCAGGTAGCGAACCTCGGGATC 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139273514246272