Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3611 86.0 5e-12 >seq3611 Length=65567 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| ||||| || ||||| ||||| || | || ||| | Sbjct 3737 ATGCAAATCTTCGTCAAGACTTTGACCGGCAAGACCATCACTCTTGAGGTTGAGTCGTCT 3678 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | | || || ||||||| ||||| || ||| | ||| |||||| Sbjct 3677 GACACTATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGCATTCCCCCGGATCAA 3618 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || ||||| ||||| ||||| | || | | ||||||||| Sbjct 3617 CAGCGCCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 3558 Query 107736 ATTCAAAAGGAGTCTAC 107752 || || ||||||||||| Sbjct 3557 ATCCAGAAGGAGTCTAC 3541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398848332162784