Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq2362 123 7e-24 seq4017 80.6 8e-11 >seq2362 Length=394 Score = 123 bits (136), Expect = 7e-24 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 30194 CCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGT 30253 ||| |||||||||||| || ||||| | | |||||||||||||||||| ||| Sbjct 374 CCGGCGATCTCCGCCACTTTGCCGAACATCGACACGCGGTGCCATTCGGTCTTCTCGACC 315 Query 30254 TGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACC 30313 | |||||||||||||||||| |||| || ||||| || || | | ||||||||| Sbjct 314 TTCTGGCCGGTCTGCTTGTCGGTCCACTGTTCACTGGTCGCCAGACTCAGGTTGGTCACG 255 Query 30314 GCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACCACCG-ACGTTGCCAACCAGAAT 30372 || |||||||| |||| |||||| || || || ||| |||| ||| |||| || Sbjct 254 GCGTTGCCGTTAGGCAGGTAGCGAACCTCGGGATCCTGGCCGCACGT-GCCGACCAATAT 196 Query 30373 GACTTTGTTAACGCC 30387 |||||||||||| || Sbjct 195 GACTTTGTTAACCCC 181 >seq4017 Length=362 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 33218 TCCTGCAAGCGCTCGACCCGGACGCTGACGATCTCCAGCAGGATGCGGGAGGCCCAGCGG 33277 |||||||| |||||||| |||||| | |||||||||||||||||| ||||||| | Sbjct 214 TCCTGCAACCGCTCGACGCGGACGGCGGTGATCTCCAGCAGGATGCGACTGGCCCAGTGC 155 Query 33278 GGCATGTGGATACTTGG 33294 || |||||||| ||||| Sbjct 154 GGTATGTGGATGCTTGG 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145628272305664