Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq3611 91.5 1e-13 >seq3611 Length=65567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | |||| |||| ||||| || || || |||||||| ||| Sbjct 3511 CCACCGCGGAGACGAAGGACTAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3570 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| || || || || |||||||| ||||||| || || ||||| || || Sbjct 3571 AGAGTGCGACCATCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGATCCGGGGGA 3630 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||| || || || ||| ||| || | | || | ||||| | | || || Sbjct 3631 ATGCCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATAGTGTCAGACGACTCAACC 3690 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| ||| | |||||||||||||| || || ||||| ||||||||| Sbjct 3691 TCAAGAGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATTTGCATA 3738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488508238579200