Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3618 208 7e-49 seq629 118 1e-21 seq3611 93.3 4e-14 seq3571 89.7 5e-13 >seq3618 Length=19201 Score = 208 bits (230), Expect = 7e-49 Identities = 1118/1756 (64%), Gaps = 59/1756 (3%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTT 148108 |||||| |||||| ||||| || |||||||| || ||||| | |||| | |||| Sbjct 859 CGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCGCCATCTGCACAATTTGGCGCTG 918 Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168 |||||||| | ||||||||||| ||||| || || || ||| | ||| Sbjct 919 AGAG---ATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTCAGGGATGTTGGGGAT 975 Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228 | ||| | |||||| | |||| || | || ||| | || | | || Sbjct 976 GTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGACC 1035 Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288 || || | || || | | ||| | | || || ||||| |||||||| || ||||| Sbjct 1036 AAGTTCAACAAGATCCTTCAGCAGCCATGGGTTGACAACCTGGAACTCGCCAGCAAGCAC 1095 Query 148289 GCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348 || ||| | || | ||| ||| | || ||||| ||||||||||||| | |||||| Sbjct 1096 ACGGCGCTGGTAGATGTTCGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTG 1155 Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408 | || | || ||||||||| || | |||||| |||||| | || | | || Sbjct 1156 TGATGTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTT 1215 Query 148409 TATTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGTGTC-ACGTTCCACATG 148466 |||| ||| || || | |||||||||| || | || || | ||||||||||| Sbjct 1216 GATTTGCTCCTTGAG-GCTGTCCCAGTCCCACAG-GTCGCTGGGCTTGACGTTCCACATA 1273 Query 148467 TCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGC 148526 ||||| |||||||| || | || ||| |||| | |||| ||| || || | Sbjct 1274 TCGTATTGCAGAATACCTTCGGAGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCA 1333 Query 148527 GCCGCCGCCAGTTCG-CAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTG 148585 || || | || ||| | || | || ||| |||||| ||||| || || Sbjct 1334 ACCTTGGCGATCTCAACAGAT-GCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTG 1392 Query 148586 CCTGTTGAGCA---GCGCCGC---CGACTCGCTTTCGTACGGCATACGCAGCCGCACAAA 148639 | |||||||| | ||| | ||||||| | |||| ||||| | || Sbjct 1393 CTTGTTGAGCTCACGAGCCTCAGGCGACTCGA------AAGGCAATCGCAGAGCAAGGAA 1446 Query 148640 CGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCG 148699 ||||| || ||||| || || || || || ||||||||||| |||||| | || Sbjct 1447 GGCGTCAGCGAGGCCTTGAACACCGACACCGATGGGCCGGTGACGCATGTTGCTGTTACG 1506 Query 148700 CGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCA 148758 || ||| | | ||||||||||| ||||| ||||||| |||||||| ||||| | Sbjct 1507 TGC-CTCAGGGACAGGATAGTGGTTTACATCGATAATCTTGTTGAGATTGCGAACCACAA 1565 Query 148759 CCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATCTACGATGC-ATCGG 148814 | | |||| | | ||||| | || ||| | | || ||||| | || | || Sbjct 1566 CTTGGGTAACTTCGTGCAGCTTCTTGAAGTCGAAGCATGCATCATCGTAGTTGATAAAGG 1625 Query 148815 TTCACGGCGATAGAG--GCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTA 148872 || | | |||| || || ||||| || || ||| || || || ||||| | Sbjct 1626 CAGACAGAGCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGA 1685 Query 148873 CGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGC 148932 |||||| | ||| || ||| || ||| || | |||||| || |||||||| | Sbjct 1686 TGATCTCAGTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTAC 1745 Query 148933 TGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTA 148992 |||||| ||||||||||| |||||| | || ||||| || ||| | || | | Sbjct 1746 GGTTGCAAGCGTCCTTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGA 1805 Query 148993 T---GAACCGATGCAGGT----CCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGC 149045 | | ||| | || | | || | || ||||| || | |||||| | Sbjct 1806 TCGAGTACCAAAGCTTTTGAGCCTTGATGGTGCGCTTGCC-CTTG------CCCTCCCTC 1858 Query 149046 TCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGC 149103 ||||| | ||| | ||| || || |||| || ||||| ||| | || || |||| Sbjct 1859 TCGTACTTCTCGTACAATGCC--TCAAATTCCTCACCATAGCAGTCGGCAAGGCCAGGGC 1916 Query 149104 ACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGAT 149163 ||| | || |||||||| | |||| |||| | | || |||||||| || |||| Sbjct 1917 ACTCATTAGGACACATGAGTGTCCACTCGCCATTTTTCTCGACACGCTTCATGAAGAGAT 1976 Query 149164 CGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGC 149223 | || | ||| || ||| | || || || || || || ||| ||| Sbjct 1977 CCGGAATCCAAAGAGCGAGGAAAAGATCACGGGCACGAACCTCCTCTTTGCCATGGTTCT 2036 Query 149224 GGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCG 149283 || || | ||| | || | ||| | |||||| || |||| ||| | |||| | Sbjct 2037 TACGGAGATCGAGGAACTCAAAGACGTCTGAGTGCCAGGGTTCAAGGTAAATGGCGAAGG 2096 Query 149284 CGCCCTTGCGCTT---GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAA 149340 | || ||||| ||| || ||||| |||| ||| | ||||||| || || || | Sbjct 2097 CACCAGGACGCTTATTGCCACCTTGGTCAACGTAGCGGGCAGTGTTGTTGAAGACCCGGA 2156 Query 149341 CCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTC 149400 |||||| ||| |||| ||| |||||||| || | |||| | ||| || | Sbjct 2157 GCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTAGCCC 2216 Query 149401 GCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTC 149458 | | | ||| || |||| ||| ||||| || ||| | || ||||| ||||| ||| Sbjct 2217 GAATTCGGTGAACATTGAGGCCAATGCCACCAGCCATT-TTGGAGATCATAGCGCAAGTC 2275 Query 149459 GCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518 |||||| |||||||| || |||||||| |||||| | |||||||| || Sbjct 2276 TT-GAGCGTGTCATAGATGCCATCAATGCTGTCATCTTTCATGTCGACAAGAAAGCAAGA 2334 Query 149519 GCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA 149578 | | || | | | || || || ||| | ||||| |||||| || ||| | Sbjct 2335 CGATAGCTGAGCTTGAGGGGTACCAGCATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAA 2394 Query 149579 TTT-CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGC 149637 || || | ||| | | ||| | ||| | ||||| || || | || || ||||| Sbjct 2395 CTTGCTCGA-CATGAGGTTGTAGGTCTCAATAACGCGCTCAATATTGTCACCCCAGATGC 2453 Query 149638 CTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGA 149697 | | ||||||||||| | ||| ||||| || ||||| | | ||| | |||| Sbjct 2454 CGACAGCGACGCGCATAATCATGTGCTGTGGACGCTCAACAATCTTGCCGTTGAGCTTGA 2513 Query 149698 GCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 ||| ||| || || |||||| |||||||||| | ||||| || || ||| ||| Sbjct 2514 GCAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGT 2573 Query 149758 GGTCAATGGCGGCGTC 149773 | || |||| ||| Sbjct 2574 ACACGATCGCGGAGTC 2589 >seq629 Length=20836 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| |||| || ||| | | | ||||| |||||||||| Sbjct 19446 GGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 19388 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| ||||| || || ||||| |||||||| |||||| || Sbjct 19387 CAGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 19328 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| || | ||||| || || || || || | Sbjct 19327 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGG 19268 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 19267 TCTTCACGAAGATCTGCAT 19249 >seq3611 Length=65567 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || ||| | | | ||||| |||||||| || ||| Sbjct 3318 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA-TCCTCAAGCTGCTTACCAGCGA 3376 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| || ||||| || || || || || || ||||| || ||||| ||| | | Sbjct 3377 AAATCAGGCGCTGTTGATCCGGTGGAATACCCTCCTTATCCTGAATCTTGCTCTTCACGT 3436 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||| | | ||| || |||| |||| || |||||||||||||| || | Sbjct 3437 TGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATCGTCTTGCCGGTCAGAGTCTTGA 3496 Query 133648 CGAAAATCTGCAT 133660 |||| || ||||| Sbjct 3497 CGAAGATTTGCAT 3509 Score = 84.2 bits (92), Expect = 2e-11 Identities = 125/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| || ||||| ||| | ||| ||| | ||||| |||||||||| Sbjct 3768 GGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCA-TCCTCAAGCTGCTTGC 3826 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| || || || || ||||| |||||||| |||||| || Sbjct 3827 CAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTTGACT 3886 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | || | ||||||| || || || || | |||| ||| ||||| || Sbjct 3887 TGACGTTGTCGATGGTGTCGGAGGATTCGACCTCAAGAGTGATGGTCTTGCCAGT 3941 >seq3571 Length=7344 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||| ||||| || || ||||| |||||| Sbjct 6162 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 6221 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || |||| ||||| | Sbjct 6222 TCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 6281 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGC 133658 || ||||| || | || || || ||| |||| Sbjct 6282 GTCTTGCCAGTTAACGTCTTAAC--AAAGCTGC 6312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483385413597440