Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5020 84.2 5e-11 >seq5020 Length=23815 Score = 84.2 bits (92), Expect = 5e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 131861 CTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTT 131920 || || || || ||| |||||| ||||| ||||| ||||||||| | | ||||| Sbjct 18526 CTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCATCTTC 18585 Query 131921 TGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGA 131980 ||||| ||||||||||| | |||||||| ||| | || ||||| | | ||||| | Sbjct 18586 TGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACTTTCTCCAACGAGCTTATCTCTCGT 18645 Query 131981 GATGAAGCATTGCATACTGAATTTGC 132006 ||||| | | || ||||| ||||| Sbjct 18646 GATGAGGGTCTTCACACTGACTTTGC 18671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186723753435616